Pairwise Alignments

Query, 315 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 340 a.a., NTE family protein RssA from Alteromonas macleodii MIT1002

 Score =  259 bits (663), Expect = 5e-74
 Identities = 142/332 (42%), Positives = 200/332 (60%), Gaps = 32/332 (9%)

Query: 9   IGIALGSGAAKGWAHIGVLNGLAAMGIKPDKVAGCSVGALVGAAYAHNHLAELEEWVRSF 68
           IG+ALG+GAA+GW HIG++  L  +G+K D VAGCS+GA VGAAYA   L  L+EW  S 
Sbjct: 3   IGLALGAGAARGWTHIGIIEALEKLGVKIDVVAGCSIGAYVGAAYASGKLEGLKEWACSL 62

Query: 69  SSWDVLGLMDIRWRKGGLIGGEKVFDVLQSRIGDVNIEDLEYPFAAIATDLYSGQEIWFR 128
           S W VL LM +  R+GG+  G+KVFD L S   +   ED+  PFAA+ATDLY+G+E+ F 
Sbjct: 63  SDWQVLALMGVGLRRGGIASGQKVFDKLASEFCESTYEDMLKPFAAVATDLYTGREVVFN 122

Query: 129 HGDLRQAVRASCSMPGILAPVRQGERWLVDGAVVNPVPVSVSRAMGVDIVIAVDLHG-FH 187
            G +   ++ASC++P + APV  G+RWLVDGAVVNPVPV++ R +G D VIAV+L+  F 
Sbjct: 123 SGPIGDTIQASCAIPALFAPVAHGDRWLVDGAVVNPVPVNLCRQLGADFVIAVNLNADFR 182

Query: 188 SGRLQVLPVNMTSHRATKED-----------------TEMPARQETGFMDLFARG----- 225
             RL+ L  +   ++   ED                  E  A ++    D  + G     
Sbjct: 183 PLRLEKLRQDHEENQRKTEDFFTKSQNVLRQWFSPDNKEEKALEKKDEKDSVSAGNVKTE 242

Query: 226 REYVSNLTDKF---------SLGTKSNPGMIAVMSQSMGILEQRHKRARLMGDPPDICIV 276
               S++ +K           +  ++ PG+++VMS S+ IL+ R  R+RL GDPPDI I 
Sbjct: 243 EGIASDVIEKVEEELTEVPAKVNKRNPPGIMSVMSSSLEILQARVTRSRLAGDPPDILIE 302

Query: 277 PEVANIGTMEFHRADEAIAAGEAAVAKVAHLI 308
           P++ ++G MEFHRA+E  A GE  +A++A  I
Sbjct: 303 PQLTDVGIMEFHRAEELCAKGEETIARLAEQI 334