Pairwise Alignments

Query, 236 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 238 a.a., two-component system response regulator BtsR from Pectobacterium carotovorum WPP14

 Score =  257 bits (657), Expect = 1e-73
 Identities = 125/236 (52%), Positives = 178/236 (75%), Gaps = 2/236 (0%)

Query: 1   MITCLIVDDELFAREELADSLSQEADIEIIGQCSNAIEALQTITKEKPQLVFLDIQMPRI 60
           M+  +I+DDE  AREEL+  L  E+DI II QCSNA+EA+  I + +P ++FLDIQMP++
Sbjct: 1   MLKAIIIDDEQLAREELSLLLENESDITIIAQCSNALEAIPAIHRLQPDVIFLDIQMPKV 60

Query: 61  SGMELIAMLDPDTLPKIVFVTAFDEFAVKAFDNHAFDYLLKPIDADRLSKTLKRVRKDLT 120
           SG+EL+AMLDP+ +P +VFVTA+DE+AV+AF+ HAFDYLLKP+DA RLSKTL R+R+ ++
Sbjct: 61  SGLELVAMLDPENMPYVVFVTAYDEYAVRAFEEHAFDYLLKPLDAQRLSKTLNRLRRGVS 120

Query: 121 -PQAVNLIAPRSLEHLPCYSGSKLKVIPIQDVEYVFSDLSGIHVACTKGKVHTQLTLKVL 179
             + V +I+   L H+PC   +++ ++ I++VEY+ S+LSG+HV       +TQL+LK L
Sbjct: 121 VNKNVQIISEPLLRHIPCNGHNRIFLLKIEEVEYLCSELSGVHVVGVSQSGYTQLSLKTL 180

Query: 180 EEKTPLVHCHRQYLISPKAIAEIELLDTG-AEVTTLLGDKVPVSRRYLKSLKQLFG 234
           EEKTP V CHRQY+++ + + EI+L++ G AEV T  G  +PVSRRYLK LK+  G
Sbjct: 181 EEKTPFVRCHRQYMVNTEQLKEIQLMENGAAEVLTHTGKHIPVSRRYLKLLKEKLG 236