Pairwise Alignments

Query, 236 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 241 a.a., two-component system response regulator BtsR from Serratia liquefaciens MT49

 Score =  214 bits (545), Expect = 1e-60
 Identities = 113/240 (47%), Positives = 166/240 (69%), Gaps = 4/240 (1%)

Query: 1   MITCLIVDDELFAREELADSLSQEADIEIIGQCSNAIEALQTITKEKPQLVFLDIQMPRI 60
           M+  LIVDDE  AR+ L   L  E  I I+G+C+NAIEA+  I + +P +VFLDIQMPRI
Sbjct: 1   MLNVLIVDDEPSARDNLRHLLEAEEGISIVGECANAIEAISGIHRLQPDVVFLDIQMPRI 60

Query: 61  SGMELIAMLDPDTLPKIVFVTAFDEFAVKAFDNHAFDYLLKPIDADRLSKTLKRVRKDLT 120
           +G+E++ MLDP+ +P IVF+TA+DE+AV+AF+ HAFDYLLKP +  RLSKTL+R+++   
Sbjct: 61  TGLEMVGMLDPNRMPHIVFLTAYDEYAVQAFEEHAFDYLLKPAEPKRLSKTLQRLQQQRG 120

Query: 121 PQAVNLIAPRS--LEHLPCYSGSKLKVIPIQDVEYVFSDLSGIHVACTKG-KVHTQLTLK 177
            Q +  +   +  L+++PC   S++ ++   +V  + S LSG+ V    G +  T+LTL+
Sbjct: 121 QQNIAALDESAGYLKYIPCTGHSRIYLLRFDEVVAIRSRLSGVFVVRNDGMECFTELTLR 180

Query: 178 VLEEKTPLVHCHRQYLISPKAIAEIELLDTG-AEVTTLLGDKVPVSRRYLKSLKQLFGFQ 236
            LE +TPLV CHRQYL++ + + EI   + G AE+   +G+ VPVSRRYLK+LK+  G +
Sbjct: 181 TLELRTPLVRCHRQYLVNLEQVREIRFDEGGAAEMIMPVGEPVPVSRRYLKALKEELGLR 240