Pairwise Alignments

Query, 236 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 241 a.a., two component transcriptional regulator, LytTR family from Enterobacter asburiae PDN3

 Score = 95.1 bits (235), Expect = 1e-24
 Identities = 67/235 (28%), Positives = 112/235 (47%), Gaps = 7/235 (2%)

Query: 5   LIVDDELFAREELADSLSQEADIEIIGQCSNAIEALQTITKEKPQLVFLDIQMPRISGME 64
           +IV+DE  A++EL   +   + +EI+G   + ++ L+ +   +   +FLDI +P + G+ 
Sbjct: 4   IIVEDEFLAQQELTWLIKTHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGVL 63

Query: 65  LIAMLDPDT-LPKIVFVTAFDEFAVKAFDNHAFDYLLKPIDADRLSKTLKRVRKDLTPQ- 122
           L   ++     P IVFVTA+ E AV+AF+  AFDY+LKP    R+   L+++      Q 
Sbjct: 64  LAQNINQFAHKPFIVFVTAWKEHAVEAFELEAFDYILKPYQESRIVSMLQKLEAAWQQQT 123

Query: 123 AVNLIAPRSLEHLPCYSGSKLKVIPIQDVEYVFSDLSGIHVACTKGKVHTQLTLKVLEEK 182
           A      R  + +      ++ V P+ D+ Y  +      V   +      + +     K
Sbjct: 124 APASPTVRENDTINLVKDERIIVTPVNDIYYAEAHEKMTFVYTRRESYVMAMNITEFCSK 183

Query: 183 TPLVH---CHRQYLISPKAIAEIELLDTGAEVTTL--LGDKVPVSRRYLKSLKQL 232
            P  H   CHR + ++   I EIE       +  L  L  +VPVSR  +K  +QL
Sbjct: 184 LPAAHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFQVPVSRSKVKEFRQL 238