Pairwise Alignments

Query, 236 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 239 a.a., two-component system response regulator BtsR from Escherichia coli ECRC100

 Score =  238 bits (608), Expect = 6e-68
 Identities = 124/238 (52%), Positives = 173/238 (72%), Gaps = 4/238 (1%)

Query: 1   MITCLIVDDELFAREELADSLSQEADIEIIGQCSNAIEALQTITKEKPQLVFLDIQMPRI 60
           MI  LIVDDE  ARE L   L +++DIEI+G+CSNA+E +  + K +P ++FLDIQMPRI
Sbjct: 1   MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60

Query: 61  SGMELIAMLDPDTLPKIVFVTAFDEFAVKAFDNHAFDYLLKPIDADRLSKTLKRVRKDLT 120
           SG+E++ MLDP+  P IVF+TAFDE+A+KAF+ HAFDYLLKPID  RL KTL R+R++ +
Sbjct: 61  SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120

Query: 121 PQAVNLIA--PRSLEHLPCYSGSKLKVIPIQDVEYVFSDLSGIHVACTKGKV-HTQLTLK 177
            Q V+L+    ++L+ +PC   S++ ++ ++DV +V S +SG++V   +GK   T+LTL+
Sbjct: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180

Query: 178 VLEEKTPLVHCHRQYLISPKAIAEIELLDTG-AEVTTLLGDKVPVSRRYLKSLKQLFG 234
            LE +TPL+ CHRQYL++   + EI L D G AE+    G  VPVSRRYLKSLK+  G
Sbjct: 181 TLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIG 238