Pairwise Alignments

Query, 522 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 534 a.a., M28-family zinc peptidase from Caulobacter crescentus NA1000 Δfur

 Score =  197 bits (501), Expect = 8e-55
 Identities = 159/515 (30%), Positives = 235/515 (45%), Gaps = 29/515 (5%)

Query: 10  IKNLSSDEFEGRAPTTQGEKLTLDYLSKAFTEMGLKGAYQGSFLQPVPM-VSYTADEAQQ 68
           +K L+ D  EGR   T G      Y+++ F   GLK A    +LQPV   V     E   
Sbjct: 39  VKVLADDNMEGRLAGTPGFDRAAAYVAERFAAHGLKPAGTQGYLQPVSFAVQRIQAERSS 98

Query: 69  VTLAG----LPFKYRQDLVLSSRHDNGGVNIENAPLVFVGYGVNAPEYAWNDYQDLDMKG 124
           VTL       P    +DLVL++R      ++  APLVFVGYG++ PE   +D+  +D++G
Sbjct: 99  VTLVKDGVPTPLVLGEDLVLTARIAQPA-SLPEAPLVFVGYGLHMPEAGHDDFAGVDLRG 157

Query: 125 KIAVILVNDPGFARPDSGKFNGKAMTYYGRWSYKFEEASRQGALGALLIHDTEPASYPWS 184
           K+AV+L   P            +A     RW    E   + GA+G + I + +    PW+
Sbjct: 158 KVAVVLSGGPSGVSASL-----RAHAARDRW----ESLQKAGAIGLITIQNPKQVEIPWA 208

Query: 185 VVENSWTGPQQDLVLSKAEQDSRVQVEGWLTLDTATKLFEKAGLSLPTLMARAADSPINL 244
             +     PQ  L                +    A KLF  +G +L  L+   AD+   L
Sbjct: 209 RSKLRAGDPQMRLADPAMNPVKGEFFTAAMNPAQAGKLFSVSGRTLEDLLV-LADAGKAL 267

Query: 245 P---LEQTANIAFKNKAEYANSYNVVATLAGSQQ--ADEHILFTGHWDHIGKDDSKEGDK 299
           P   L Q+       +   A S NV A L GS    + E+++ T H D +G     +GD 
Sbjct: 268 PGFALNQSVKATVSRETTPATSPNVAAMLPGSDPVLSKEYVVLTAHLDGLGVGAPIDGDA 327

Query: 300 IYNGAMDNASGIAGILEIARQLADNATQGHGLARSVTFIATTGEEQGLLGSRYYAANPIY 359
           I NGAMDNASG+A ++E A  L   A       RS+ F+A T EEQGLLGS+Y+A  P  
Sbjct: 328 INNGAMDNASGVASLIEQAAALKAGAPP----KRSIIFLAVTAEEQGLLGSQYFAERPTV 383

Query: 360 PIDKTVAVLNLDSTNIYGKTKDFTIVGKGKSELENYLIDAAKQQNRIALGEKNPASGGFF 419
                VA +N+D         +  ++G+ +S L      AA  Q    + +  P    F 
Sbjct: 384 DKKAIVANVNMDMFMPSRPASNIIVMGEEESTLGPIARRAAASQGFAVMPDPAPNQLSFV 443

Query: 420 RSDHFSFAKLGVPAVFAGGGSEPIDAATADYKTQMQATMKGCYHNVCDEYREDWDLSGAI 479
           RSD +SF + GVPA+ AG  + P+ +  A    Q +A     YH   D+  + +DL  A+
Sbjct: 444 RSDQYSFIRTGVPAL-AGRLAHPVGSPEAAADRQWRAER---YHGPKDDLSQPFDLPTAV 499

Query: 480 QDLEVYYQVTRELGNSQDWPGYYPGTEFNNLRPAK 514
           +       + RE+ ++ + P + P + F      K
Sbjct: 500 RFNAYMATLIREIADTPERPQWLPTSFFKRFATGK 534