Pairwise Alignments

Query, 522 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 318 a.a., M28 family peptidase from Brevundimonas sp. GW460-12-10-14-LB2

 Score = 84.3 bits (207), Expect = 6e-21
 Identities = 57/184 (30%), Positives = 90/184 (48%), Gaps = 15/184 (8%)

Query: 265 NVVATLAGSQQADEHILFTGHWDHIGKDDSKEGDKIYNGAMDNASGIAGILEIARQLADN 324
           N+V  + G++ AD +I+ T H+DH+G +D     +I++GA DNASG+A +LE+A +L   
Sbjct: 107 NIVGLIPGTRVADRYIVVTAHYDHVGVNDG----QIFHGADDNASGVATMLELAARLKAQ 162

Query: 325 ATQGHGLARSVTFIATTGEEQGLLGSRYYAANPIYPIDKTVAVLNLDSTNIYGKTKDFTI 384
             +      SV  +A  GEE+GLLG+R +   P  P+      LN D T          +
Sbjct: 163 PPE-----HSVLIVALDGEERGLLGAREFVKVPPVPLSSLSLNLNFDMTARAETDGHLWV 217

Query: 385 VGKGKSELENYLIDAAKQQNRI--ALGEKNPASGG----FFRSDHFSFAKLGVPAVFAGG 438
            G  +      +++A      +  A G+  P   G       SDH +F + GVP ++ G 
Sbjct: 218 TGTYQHPNLRPVLEAVVPNGAVSFAFGKDTPQDTGENNWVDASDHGAFHEAGVPFLYMGV 277

Query: 439 GSEP 442
              P
Sbjct: 278 DYHP 281



 Score = 24.6 bits (52), Expect = 0.005
 Identities = 10/37 (27%), Positives = 21/37 (56%)

Query: 9  DIKNLSSDEFEGRAPTTQGEKLTLDYLSKAFTEMGLK 45
          D++ LS+D+ +GR   ++G +    Y+      MG++
Sbjct: 44 DVRILSADDMQGRDTGSEGGERARAYIVSRLEAMGVQ 80