Pairwise Alignments

Query, 439 a.a., membrane protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 439 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  509 bits (1312), Expect = e-149
 Identities = 261/440 (59%), Positives = 336/440 (76%), Gaps = 2/440 (0%)

Query: 1   MNAVVIAVCLMLALSLARVNVVVALTISALVAGLVGGMDLHRTIDAFNTGLGGGAQIALS 60
           MNAV+ AV +ML LSL+RV+VV+AL I AL  GLVGG+ +  T+ AFN GLGGGA +ALS
Sbjct: 1   MNAVIAAVGIMLILSLSRVHVVIALIIGALAGGLVGGLGIEGTLKAFNGGLGGGATVALS 60

Query: 61  YALLGAFAVALSHSGLTTLISNSIIKSLGREPNATNTNWVRWLLLLSLLAMSMASQNILP 120
           YALLGAFAVA++ SGL   +++  +  + R  +A     V+WL++  +LA++++SQNILP
Sbjct: 61  YALLGAFAVAIAKSGLAHALADRALGMIDRRGDAKGGK-VKWLMIGLMLAVAVSSQNILP 119

Query: 121 IHIAFIPILVPPLLHVMTKLNIDRRLVACVLTFGLVTTYMILPVGFGGIFLNDILLSNLT 180
           IHIAFIP+LVPPLL+V+T+L IDRRL+ACV+TFGL+T YM LPVGFG IFLN+ILL+N+ 
Sbjct: 120 IHIAFIPLLVPPLLYVLTRLRIDRRLIACVITFGLITPYMFLPVGFGNIFLNEILLANVA 179

Query: 181 SNGLVAVRDQIPPAMLIPAAGMVVGLLIAVFVSYRKPRVYDETKVLSAEPEE-KLNKRNI 239
             G+      +  AM IPAAGM+VGLL+AVF+SYRK R YD  ++   E    + N   +
Sbjct: 180 RAGVDVSGVNVTHAMAIPAAGMLVGLLVAVFISYRKKRDYDLARIQQVEQVSVQYNPLTL 239

Query: 240 VIAALAILATLFVQLETDSMIFGALVGFMIFSFSGALKHVADQDIFTQGVRMMANIGFIM 299
           ++A LAI A   VQL  DSMI GA+VGF+IFS SG +K     D+FT+G++MMA IGFIM
Sbjct: 240 LVAGLAIAAAFIVQLLLDSMIIGAMVGFLIFSLSGIVKWKETDDLFTEGMKMMAMIGFIM 299

Query: 300 ISAAGFAAVVKETGEVGTLVSSLSSLIGDNKALAAFLMLVVGLLITMGIGSSFSTIPIIA 359
           I+A+GFA V+K TGEV +LV + +  I  +K + A LML+VGLL+TMGIGSSFST+PI+A
Sbjct: 300 ITASGFAEVMKATGEVKSLVETSAQWIDHSKGVGALLMLLVGLLVTMGIGSSFSTVPILA 359

Query: 360 TIYVPLALSFGFSVPATIALVGTAAALGDAGSPASDSTLGPTSGLNADGQHDHIRDSVIP 419
            I+VPL +  GF   AT+ ++GTA ALGDAGSPASDSTLGPTSGLN DGQH HI D+V+P
Sbjct: 360 AIFVPLCVQLGFDPLATVCIIGTAGALGDAGSPASDSTLGPTSGLNVDGQHHHIWDTVVP 419

Query: 420 TFIHYNIPLLVFGWIAAMVL 439
           TFIHYN+PL+ FGW+AAM L
Sbjct: 420 TFIHYNLPLMAFGWLAAMTL 439