Pairwise Alignments

Query, 442 a.a., tolB protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 430 a.a., Tol-Pal system beta propeller repeat protein TolB from Pectobacterium carotovorum WPP14

 Score =  380 bits (975), Expect = e-110
 Identities = 200/442 (45%), Positives = 286/442 (64%), Gaps = 12/442 (2%)

Query: 1   MKILAKWLTLVVLLCTTPAKAALDIVITEGVDAARPIAVMPFQWQGAGAPPQAIADVVMS 60
           MK + K     ++L T  A A + I IT+GVD+ARPI V+PF+W G GA P+ +  +V +
Sbjct: 1   MKQVLKVALSFLMLWTAVAHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDVGGIVGA 60

Query: 61  DLVRSGTFKPLDELGLPQRGIGALAQFDANAWTNVSAEALVVGSVKPYGADQFLVSFELI 120
           DL  SG F P+D   +PQ+   A ++    AWT +  +A+VVG V+P     +LVS++L+
Sbjct: 61  DLRNSGKFNPIDANRMPQQPATA-SEVTPAAWTALGIDAVVVGQVQPSADGSYLVSYQLV 119

Query: 121 DLVKAQNQALKGSANPTELLMDSRQTVISATQFRQYGHRISDIVYEKLTGIRGAFLTRIS 180
           D           S NP  +L  + Q  ++    R   H  SD V+EKL+GI+GAF TRI+
Sbjct: 120 DT----------SGNPGSVLAQN-QFKVTKQWLRYAAHTASDEVFEKLSGIKGAFRTRIA 168

Query: 181 YVVVNHSQKAAYSLMIADYDGYNEQMLLRSPEPLMSPAWSPDGRRLAYVSFENKKAEIFV 240
           YVV  +  +  Y L +ADYDGYN+ ++ RSP+PLMSPAWS DG +LAYV+FE+ ++ + +
Sbjct: 169 YVVQTNGGQFPYELRVADYDGYNQFVVHRSPQPLMSPAWSADGSKLAYVTFESGRSALVI 228

Query: 241 QDLYTQVRTKVSSFSGINGAPSFSPDGKSLAVTLSKDGQPEIYVIDIATKAIKRITNHYS 300
           Q L      +V+SF   NGAPSFSPDG  LA  LSK G   +YV+++ +  I ++T+  S
Sbjct: 229 QTLANGAIRQVASFPRHNGAPSFSPDGSKLAFALSKSGSLNLYVMNLGSGQISQVTDGRS 288

Query: 301 IDTEPSWYPDGKSLLFTSERGGRPQLYRVDLNSGKVTRETFEGEWNLGGSITPDGRSMIF 360
            +TEP+W+PD ++L +TS++ GRPQ+Y+V+ N G   R T+EG  N    ++ DG+ ++ 
Sbjct: 289 NNTEPTWFPDSQTLAYTSDQAGRPQVYKVNANGGAPQRLTWEGSQNQDSDVSADGKFLVT 348

Query: 361 VNRTNGKFNIARMDLSTRFMQVLTSTRLDESPSVAPNGTMVIYGTTHQGKQVLAAVSTDG 420
           V+   G  +I+++DL T  +QVLT T LDE+PS+APNGTMVIY +      VL  VSTDG
Sbjct: 349 VSSNGGAQHISKLDLVTGAVQVLTDTFLDETPSIAPNGTMVIYSSKQGLGSVLQLVSTDG 408

Query: 421 RFKARLPAGQGEVKSPSWSPFL 442
           RFKARLPA  G+VK P+WSP+L
Sbjct: 409 RFKARLPATDGQVKFPAWSPYL 430