Pairwise Alignments

Query, 442 a.a., tolB protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 447 a.a., protein TolB from Magnetospirillum magneticum AMB-1

 Score =  180 bits (456), Expect = 9e-50
 Identities = 135/460 (29%), Positives = 225/460 (48%), Gaps = 38/460 (8%)

Query: 1   MKILAKWLTLVVL--LCTTPAKAALDIVITEGVDAARPIAVMPFQWQGAGAPPQA----- 53
           ++ LA +   V+L      PA+A + I IT G     PIA+  F    AGA  Q      
Sbjct: 7   IRSLAAFAVFVILGVAAVLPAQAEVRIDITRGQMKPLPIAIPDF----AGASAQDNRMGA 62

Query: 54  -IADVVMSDLVRSGTFKPLDELGLPQRGIGALAQFDANAWTNVSAEALVVGSVKPYGADQ 112
            IA VV +DL RSG FKP+D     Q      A      W  ++AEALV G ++     +
Sbjct: 63  DIARVVSADLERSGLFKPIDPKAFIQNAASLQAGPRFPDWKAINAEALVSGKIESGADGR 122

Query: 113 FLVSFELIDLVKAQNQALKGSANPTELLMDSRQTVISATQFRQYGHRISDIVYEKLTGIR 172
             V F L D+               E  M       S   +R+  H+++D +Y+++TG  
Sbjct: 123 VRVEFRLWDVFN-------------EAYMTGWTLSASPQDWRRLSHKVADAIYKRVTGED 169

Query: 173 GAFLTRISYVVVN---HSQKAAYSLMIADYDGYNEQMLLRSPEPLMSPAWSPDGRRLAYV 229
           G F T+I Y+  +   + +K   S+M  D DG N + L    E +++P +SP  R + Y+
Sbjct: 170 GYFDTQIVYIAESGPKNDRKKRLSIM--DQDGENHRFLTDGSELVLTPRFSPSAREITYL 227

Query: 230 SFENKKAEIFVQDLYTQVRTKVSSFSGINGAPSFSPDGKSLAVTLSKDGQPEIYVIDIAT 289
           S+      +++ +L T  R  + +F G+  AP FSPDG  +  +++++G  EIY +++ T
Sbjct: 228 SYFKGVPRVYIFNLDTGRRESLGNFPGMTFAPRFSPDGNKVVFSMAENGNTEIYEMNLLT 287

Query: 290 KAIKRITNHYSIDTEPSWYPDGKSLLFTSERGGRPQLYRVDLNSGKVTRETFEGEWNLGG 349
           +  +++T + +IDT PS+ PDG+ ++F S+RGG  Q+Y +  +     R +F G+   G 
Sbjct: 288 RQKRQLTMNPAIDTAPSYSPDGQQIVFESDRGGGQQIYTMSADGSNPQRISF-GDGRYGT 346

Query: 350 SI-TPDGRSMIFVNRTNGKFNIARMDLSTRFMQVLTSTRLDESPSVAPNGTMVIY----G 404
            + +P G  + F  +  G+F I  M       ++L    L E P+ APNG ++ +     
Sbjct: 347 PVWSPRGDLIAFTKQKGGQFFIGVMRTDGSGERLLAEGFLVEGPTWAPNGRVLSFFRESP 406

Query: 405 TTHQGK-QVLAAVSTD-GRFKARLPAGQGEVKSPSWSPFL 442
           +  +G+ QV+   + D      R+     +   P+WSP +
Sbjct: 407 SDERGRGQVVRLYTIDLTGVNERVLLTPVDGSDPAWSPLI 446