Pairwise Alignments

Query, 442 a.a., tolB protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 430 a.a., Tol-Pal system protein TolB from Serratia liquefaciens MT49

 Score =  388 bits (997), Expect = e-112
 Identities = 202/431 (46%), Positives = 284/431 (65%), Gaps = 12/431 (2%)

Query: 12  VLLCTTPAKAALDIVITEGVDAARPIAVMPFQWQGAGAPPQAIADVVMSDLVRSGTFKPL 71
           ++L  +   A + I IT+GVD+ARPI V+PF+W G G PP+ I  +V +DL  SG F P+
Sbjct: 12  LILWASVLHAEVRIEITQGVDSARPIGVVPFKWAGPGTPPEDIGKIVGADLRNSGKFNPI 71

Query: 72  DELGLPQRGIGALAQFDANAWTNVSAEALVVGSVKPYGADQFLVSFELIDLVKAQNQALK 131
           D   +PQ+   A ++    AWT +  +A+VVG V+P     +L+S++L+D          
Sbjct: 72  DVARMPQQPTTA-SEVTPAAWTALGIDAVVVGQVQPGADGGYLISYQLVDT--------- 121

Query: 132 GSANPTELLMDSRQTVISATQFRQYGHRISDIVYEKLTGIRGAFLTRISYVVVNHSQKAA 191
            S +P  +L  + Q  ++    R   H  SD V+EKLTGI+GAF TRI+YVV  +  K  
Sbjct: 122 -SGSPGTVLAQN-QYKVTKQWLRYSAHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGKFP 179

Query: 192 YSLMIADYDGYNEQMLLRSPEPLMSPAWSPDGRRLAYVSFENKKAEIFVQDLYTQVRTKV 251
           Y L +ADYDGYN+ ++ RSPEPLMSPAWSPDG +LAYV+FE+ ++ + VQ L      ++
Sbjct: 180 YELRVADYDGYNQFVVHRSPEPLMSPAWSPDGSKLAYVTFESGRSALVVQTLANGAIRQI 239

Query: 252 SSFSGINGAPSFSPDGKSLAVTLSKDGQPEIYVIDIATKAIKRITNHYSIDTEPSWYPDG 311
           +SF   NGAP+FSPDG  LA  LSK G   +YV+++ +  I +IT+  S +TEP+W+PDG
Sbjct: 240 ASFPRHNGAPAFSPDGSRLAFALSKSGSLNLYVMNLGSGQITQITDGRSNNTEPTWFPDG 299

Query: 312 KSLLFTSERGGRPQLYRVDLNSGKVTRETFEGEWNLGGSITPDGRSMIFVNRTNGKFNIA 371
           +SL +TS++GGRPQ+Y+V  + G   R T+EG  N    ++ DG+ ++ V+  NG  +IA
Sbjct: 300 QSLAYTSDQGGRPQIYKVSASGGASQRLTWEGSQNQDSEVSSDGKFLVMVSSNNGAQHIA 359

Query: 372 RMDLSTRFMQVLTSTRLDESPSVAPNGTMVIYGTTHQGKQVLAAVSTDGRFKARLPAGQG 431
           + DL +  +QVLT T LDE+PS+APNGTMVIY +T     VL  VSTDGRFKARLPA  G
Sbjct: 360 KQDLGSGAVQVLTGTFLDETPSIAPNGTMVIYSSTQGMGSVLQLVSTDGRFKARLPATDG 419

Query: 432 EVKSPSWSPFL 442
           +VK P+WSP+L
Sbjct: 420 QVKFPAWSPYL 430