Pairwise Alignments

Query, 442 a.a., tolB protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 454 a.a., tol-pal system beta propeller repeat protein TolB from Kangiella aquimarina DSM 16071

 Score =  390 bits (1002), Expect = e-113
 Identities = 203/454 (44%), Positives = 289/454 (63%), Gaps = 13/454 (2%)

Query: 1   MKILAKWLTLV-VLLCTTPAKAALDIVITEGVDAARPIAVMPFQWQGAGA----PPQAIA 55
           MK + K + ++ + L    +KA + I ITEG   ARP+AV+PF+++        PP   A
Sbjct: 1   MKHILKSIVIISISLMALASKAEIQIYITEGRSDARPVAVVPFKFESESEVQAQPPFDFA 60

Query: 56  DVVMSDLVRSGTFKPLDELGLPQRGIGALAQFDANAWTNVSAEALVVGSVKPYGADQFLV 115
            ++  DL RSG F P +   LPQ    ++       W  +  + +V G+V    +  ++V
Sbjct: 61  KIIADDLRRSGKFNPTEISKLPQHPY-SIEDVKLEQWRELGVDGVVYGTVTQTASGNYMV 119

Query: 116 SFELID------LVKAQNQALKGSANPTEL-LMDSRQTVISATQFRQYGHRISDIVYEKL 168
           S++LID      +  +  +A      PT   LM  +  ++    FR   H  +D +YE L
Sbjct: 120 SYDLIDPFNDKAIFSSDIEAGSYPIIPTSSHLMVLKTKIVDNDNFRWGAHIAADEIYEAL 179

Query: 169 TGIRGAFLTRISYVVVNHSQKAAYSLMIADYDGYNEQMLLRSPEPLMSPAWSPDGRRLAY 228
           TG RGAF T+I+YV VN +    + L +AD DG+N + +  S  P+MSP WSPD  +L+Y
Sbjct: 180 TGERGAFATQIAYVEVNRNDPRPHQLFVADSDGFNAKRIFASRSPIMSPTWSPDATKLSY 239

Query: 229 VSFENKKAEIFVQDLYTQVRTKVSSFSGINGAPSFSPDGKSLAVTLSKDGQPEIYVIDIA 288
           V+FEN ++EI VQ++ +  R  V+S+ G N AP++SPDG  + V LSKDG PE+Y++D+ 
Sbjct: 240 VTFENGRSEIVVQNIASGQREIVASYKGFNSAPAWSPDGSKMVVVLSKDGNPELYLLDLT 299

Query: 289 TKAIKRITNHYSIDTEPSWYPDGKSLLFTSERGGRPQLYRVDLNSGKVTRETFEGEWNLG 348
            K ++R+T HY+IDTEPSW PDGKSL+FTS+RGGRPQ+YR+ L   KV R TFEG  N G
Sbjct: 300 GKRLQRLTRHYAIDTEPSWAPDGKSLIFTSDRGGRPQIYRITLADNKVERVTFEGIHNAG 359

Query: 349 GSITPDGRSMIFVNRTNGKFNIARMDLSTRFMQVLTSTRLDESPSVAPNGTMVIYGTTHQ 408
               PDG+S++ V++ NG ++IA  DL+T  + VLT T LDES SVAPNG+M+I+ T   
Sbjct: 360 AEFAPDGKSIVMVHQANGAYHIAAQDLATGQLTVLTKTTLDESLSVAPNGSMIIFSTVDG 419

Query: 409 GKQVLAAVSTDGRFKARLPAGQGEVKSPSWSPFL 442
           G++VL+AVS DGRFKARLPA  GEVK+P+WSPF+
Sbjct: 420 GQKVLSAVSMDGRFKARLPATVGEVKAPAWSPFI 453