Pairwise Alignments

Query, 442 a.a., tolB protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 454 a.a., Tol-Pal system beta propeller repeat protein TolB from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  185 bits (470), Expect = 2e-51
 Identities = 135/431 (31%), Positives = 217/431 (50%), Gaps = 37/431 (8%)

Query: 23  LDIVITEGVDAARPIAVMPFQWQGAGAPPQAIADVVMSDLVRSGTFKPLDELGLPQRGIG 82
           +++ I +GV     IAV+PF    AG     I++VV ++L RSG F+PL+     + G+ 
Sbjct: 32  VEVEIDQGVLRPLQIAVVPF----AGTHGSDISNVVSANLKRSGFFEPLNPSSFIETGLT 87

Query: 83  ALAQFDANAWTNVSAEALVVGSVKPYGADQFLVSFELIDLVKAQNQALKGSANPTELLMD 142
                +   WT + A+A++ G V   G  +  V F L D  +             +  + 
Sbjct: 88  LANAPNFPQWTQIGAQAVLYGGVTTRGDGRLDVGFRLYDPYR-------------QCQLV 134

Query: 143 SRQTVISATQFRQYGHRISDIVYEKLTGIRGAFLTRISYVVVNHSQKAAYS-LMIADYDG 201
           S Q   +  Q+R+  H+ISD++Y+++TG  G F +R+ +V    +     + L IAD DG
Sbjct: 135 SYQFTATQEQWRRIAHKISDVIYQRMTGEAGFFDSRVIFVSEEGTPLNRINRLTIADQDG 194

Query: 202 YNEQMLLRSPEPLMSPAWS---PDGRRLAYVSFENKKAEIFVQDLYTQVRTKVSSFSGIN 258
           +N   L +  E +MSP +S   PD   + YV+     + I++ +L T  R  +  F G  
Sbjct: 195 FNPTYLTQGDEVIMSPRFSLSQPD--EITYVALGKDYSRIYLYNLTTGRRESLGEFDGQV 252

Query: 259 GAPSFSPDGKSLAVTLSKDGQPEIYVIDIATKAIKRITNHYSIDTEPSWYPDGKSLLFTS 318
            AP FS DG  +A ++ + G  ++YV+D+ ++ I R+T+   IDT PS+ PDG  ++FTS
Sbjct: 253 LAPRFSNDGNKIAFSIIRGGNTDVYVMDLRSRQITRLTSDPGIDTSPSFSPDGSQIVFTS 312

Query: 319 ERGGRPQLYRVDLNSGKVTRETFEGEWNLGG-----SITPDGRSMIFVNRTNGKFNIARM 373
           +R G  +LY V  + G   R    G    GG     S +P G  + F  +  G+F+   M
Sbjct: 313 DRSGSARLY-VMRSDGSGQRPISRG----GGIYTAPSWSPTGNLIAFTKQGGGRFSTGVM 367

Query: 374 DLSTRFMQVLTSTRLDESPSVAPNGTMVIYG-TTHQGKQVLAAVSTDGRFKARLPAG-QG 431
           +      ++L+S+  +E P+ APNG  V++   T  G   L  V   GR  ++  AG  G
Sbjct: 368 NADGSGERILSSSYFEEGPNWAPNGRYVMFARQTPGGDTRLWTVDLSGRVVSQ--AGYNG 425

Query: 432 EVKSPSWSPFL 442
               P+WSP L
Sbjct: 426 RGTDPAWSPLL 436