Pairwise Alignments

Query, 590 a.a., DNA damage response helicase (yejH or radD) (from data) from Shewanella oneidensis MR-1

Subject, 1137 a.a., DEAD/DEAH box helicase family protein from Serratia liquefaciens MT49

 Score = 64.7 bits (156), Expect = 2e-14
 Identities = 101/398 (25%), Positives = 155/398 (38%), Gaps = 71/398 (17%)

Query: 4   NSSPSVILRDYQQQAVDAAIVHFKKSTDSAVLVLPTGAGKSIVIAELARI---ARG--RV 58
           N   +V  R YQ + +      F      +++V  TG GK+ V   L+++   AR   R+
Sbjct: 355 NEGKAVAGRLYQLETIARVSERFTNKYRQSLIVQATGTGKTRVAIALSKLMIDARWVKRI 414

Query: 59  LVLTHVKELVAQNAQKVGLLTTEASIYSAGLNKKSSV--GKTVVASIQSAARALGQFNEP 116
           L L   +EL  Q A      T E  +Y  G +KK      +  +A+     + +  F+  
Sbjct: 415 LFLCDRRELRKQAANAFNQFTNEP-LYVVGKSKKEDRQNARIYIATYPGMMKIMDHFDVG 473

Query: 117 -FSLVIIDECHRVSLEKTSQYQQLLSHLQQRNPQLKLLGLTATPYRLGT----------G 165
            F L+I DE HR          +    LQ        +GLTATP  + +          G
Sbjct: 474 YFDLIIADESHRSIYNVYGDVFKYFDALQ--------IGLTATPIDMVSKTTFGLFGCEG 525

Query: 166 WIYKRHY--HGKVGSPEL---------------GIFEQCIFELPIRPLIKQGYLTAPTLF 208
            I   +Y     +    L               GI  + + +  IR L  QG       F
Sbjct: 526 RIPTANYSLEDAIADNNLVPYEVVTHTTEFLREGIKREKLSDQQIRELEDQGVDPNTLEF 585

Query: 209 DGLSAQYDFSQIKANKNGEYPEAQVNDLLNHAGRATTAIVKQLIELSHHRQG-IIIFAAT 267
           +G S        +A  N +     + +L+ +           L +      G  IIFA  
Sbjct: 586 EGKSLD------EAIYNNDTNRHILRNLMENG----------LKDADGQLPGKTIIFARN 629

Query: 268 VRHAEEIVSQLNKEHREQTAIVTAQTPDN---ERDELIERFKA------RELKFLVNVAV 318
            +HA  ++++L  E   Q A    Q  DN     ++LI+ FK       +EL   ++V +
Sbjct: 630 HKHAL-LLNKLFDEMYPQFAGHFCQVIDNYDPRAEQLIDDFKGLDESTNKELTLAISVDM 688

Query: 319 LTTGFDAPHVDLIAILRPTASVSLFQQMIGRGLRICEG 356
           L TG D P +  +   +P  S   F QMIGRG R+C G
Sbjct: 689 LDTGIDVPEIVNLVFAKPVKSKVKFWQMIGRGTRLCPG 726