Pairwise Alignments

Query, 590 a.a., DNA damage response helicase (yejH or radD) (from data) from Shewanella oneidensis MR-1

Subject, 748 a.a., DEAD/DEAH box helicase from Escherichia coli ECRC99

 Score = 70.1 bits (170), Expect = 3e-16
 Identities = 87/370 (23%), Positives = 155/370 (41%), Gaps = 47/370 (12%)

Query: 11  LRDYQQQAVDAAIVHFKKSTDSAVLVLPTGAGKSIVIAELARIARGRVLVLTHVKELVAQ 70
           LR  Q++AV A + +     D+ VL  PT  GK++  A +    +   L+L H  EL+ Q
Sbjct: 386 LRAEQEEAVSALLRY-----DTGVLCAPTAFGKTVTAAAVIAKRKVNTLILVHRTELLKQ 440

Query: 71  NAQKVGL-LTTEASIYSAGLNKKSSVGKTVVASIQSAAR--ALGQFNEPFSLVIIDECHR 127
             +++ + L    SI   G  K    G   +A +QS +R   +      +  +I+DECH 
Sbjct: 441 WQERLAVFLQAGDSIGIIGGGKHKPCGNIDIAVVQSISRQGEVEPLVRNYGQIIVDECHH 500

Query: 128 VSLEKTSQYQQLLSHLQQRNPQLKLLGLTATPYRLGTGWIYKRHYHGKVGSPELGIFEQC 187
           +     S      + L++ N +  LLGLTATP R       +   H     P + ++   
Sbjct: 501 IGAVSFS------AILKETNARY-LLGLTATPIR-------RDGLH-----PIIFMYCGA 541

Query: 188 IFELPIRPLIKQGYLTAPTLFDGLSAQYDFSQIKANKNGEYPEAQVNDLLNHAG---RAT 244
           I    +RP  K+       L   + +++    + +       +A++ D+          T
Sbjct: 542 IRHTAVRP--KESPHNLEVL---IRSRFTSGHLPS-------DARIQDIFREIALDHDRT 589

Query: 245 TAIVKQLIELSHHRQGIIIFAATVRHAEEIVSQLNKEHREQTAIVTAQTPDNERDELIER 304
            AI ++ ++     + +++      H +EI S +N   +    I+  +    +R  LI  
Sbjct: 590 VAIAEEAMKAFGQGRKVLVLTERTDHLDEIASVMN-SLKLSPFILHGRLSKKKRAMLISG 648

Query: 305 FKA---RELKFLVNVA-VLTTGFDAPHVDLIAILRPTASVSLFQQMIGRGLRICEGKKDC 360
             A      + L++   ++  GFD P +D + +  P +     QQ  GR  R   GK D 
Sbjct: 649 LNALPPDSPRILLSTGRLIGEGFDHPPLDTLILAMPVSWKGTLQQYAGRLHREHTGKSDV 708

Query: 361 LVIDYAANGY 370
            +ID+    Y
Sbjct: 709 RIIDFVDTAY 718