Pairwise Alignments

Query, 197 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 137 a.a., inner membrane protein of unknown function from Pseudomonas putida KT2440

 Score = 50.8 bits (120), Expect = 1e-11
 Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 7/94 (7%)

Query: 16  LFDG---LAPLALRLYLAPVLMQAGYNKLTHFDDTVAWFANPDWGLGLPMPTLMAALAAG 72
           LFDG   +  L  R+ L  + + +G+ KLT FD TV +  +    LG P P L A +A  
Sbjct: 5   LFDGQRDIIILIARVLLMVLFVLSGWAKLTGFDGTVGYMTS----LGAPAPMLAAGIAVI 60

Query: 73  TEFFGAILLLLGLATRLISIPLMITMLVAAFTVH 106
            EF  AILL+LG  TR ++    + +L  A   H
Sbjct: 61  MEFLVAILLILGFYTRPLAFLFALFVLGTALLGH 94