Pairwise Alignments

Query, 145 a.a., prophage MuSo2, positive regulator of late transcription, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 116 a.a., DNA-binding protein from Pectobacterium carotovorum WPP14

 Score = 51.6 bits (122), Expect = 4e-12
 Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 4/83 (4%)

Query: 63  DVDTKIAISLLNSICKE----FGGVQFYLPRGCQLEIEIMNLSIWHEFKGDNVEELARKY 118
           ++D + A  + N++ K     +GG   Y P G        +L I+ EF G N   LA+KY
Sbjct: 30  ELDPQTAELVGNAVAKHMMTVWGGQNVYFPMGISWRASQRDLQIYEEFDGRNHSALAKKY 89

Query: 119 NKSMQHIWRVIAKMRSREIKNRQ 141
           N S+Q I++++  MR  E++ +Q
Sbjct: 90  NVSLQWIYKIVRTMRKEELQAKQ 112