Pairwise Alignments

Query, 372 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 374 a.a., tRNA-specific 2-thiouridylase MnmA from Pseudomonas putida KT2440

 Score =  496 bits (1277), Expect = e-145
 Identities = 242/356 (67%), Positives = 287/356 (80%), Gaps = 3/356 (0%)

Query: 12  KVIVGMSGGVDSSVSAYLLMQQGYQVEGLFMKNWEEDDNDEYCAAAEDLKDAQAVCDKLG 71
           +VIVGMSGGVDSSVSA LL++QGYQVEGLFMKNWEEDD  EYC A EDL DAQAVCD++G
Sbjct: 13  RVIVGMSGGVDSSVSALLLIEQGYQVEGLFMKNWEEDDGTEYCTAREDLADAQAVCDRIG 72

Query: 72  IKLHTVNFAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLEFADDILDADYIAM 131
           IKLHT NFAAEYWDNVFE+FL EYKAGRTPNPDI+CN+EIKFKAFL++A   L AD IA 
Sbjct: 73  IKLHTANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNREIKFKAFLDYALS-LGADLIAT 131

Query: 132 GHYVRRRDNEDGTTQMLRGVDNNKDQSYFLYTLSHEQVARSLFPVGELEKHEVREIAKQM 191
           GHYVRRRD     T++L+G+D NKDQSYFL+ +  +++AR+LFPVGELEK EVR IA++ 
Sbjct: 132 GHYVRRRDT-GALTELLKGLDPNKDQSYFLHAVGGQEIARTLFPVGELEKPEVRAIAEKH 190

Query: 192 GLITHDKKDSTGICFIGERKFTEFLGNYLPAQPGNIETADGEVIGTHQGLMYHTLGQRKG 251
           GL T  KKDSTGICFIGER+F++FL  YLPAQPG+IET +GEVIG H GLMYHT+GQR+G
Sbjct: 191 GLATAKKKDSTGICFIGERRFSDFLKQYLPAQPGDIETTEGEVIGRHHGLMYHTIGQRQG 250

Query: 252 LGIGGMKNSNDDPWYVVDKDLKRNVLVVGQGGHHPRLMSNGMLVNQLHWVDRKGPINGSQ 311
           LGIGG+K+++D+PWYV+ KDL RNVLVVGQG  HP L S  +L +++ WV+     +  Q
Sbjct: 251 LGIGGLKDASDEPWYVLHKDLARNVLVVGQGNEHPWLFSRALLASEIFWVNPVDLGSPRQ 310

Query: 312 IVVKTRYRQQDIPCTLTYLDDNTLKVVFDEPVAAVTPGQSAVFYDGEVCLGGGIID 367
           +  K RYRQ D  CTL        + VFDEP  AVTPGQS VFYDGEVCLGGG+I+
Sbjct: 311 LTAKVRYRQSDQRCTLERTASG-YRAVFDEPQRAVTPGQSVVFYDGEVCLGGGVIE 365