Pairwise Alignments

Query, 372 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 367 a.a., tRNA 2-thiouridine(34) synthase MnmA from Serratia liquefaciens MT49

 Score =  568 bits (1464), Expect = e-167
 Identities = 278/362 (76%), Positives = 314/362 (86%), Gaps = 3/362 (0%)

Query: 11  KKVIVGMSGGVDSSVSAYLLMQQGYQVEGLFMKNWEEDDNDEYCAAAEDLKDAQAVCDKL 70
           KKVIVGMSGGVDSSV+AYLL QQGYQV GLFMKNWEEDD++EYC+AA DL DAQAVCDKL
Sbjct: 7   KKVIVGMSGGVDSSVTAYLLQQQGYQVAGLFMKNWEEDDDEEYCSAATDLADAQAVCDKL 66

Query: 71  GIKLHTVNFAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLEFADDILDADYIA 130
           GI+LHTVNFAAEYWDNVFE FL EYKAGRTPNPDI+CNKEIKFKAFLEFA + L AD+IA
Sbjct: 67  GIELHTVNFAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADFIA 126

Query: 131 MGHYVRRRDNEDGTTQMLRGVDNNKDQSYFLYTLSHEQVARSLFPVGELEKHEVREIAKQ 190
            GHYVRR+D  DG +++LRGVD NKDQSYFLYTLSHEQVA+SLFPVGELEK EVR IA+Q
Sbjct: 127 TGHYVRRQD-VDGKSRLLRGVDGNKDQSYFLYTLSHEQVAQSLFPVGELEKPEVRRIAQQ 185

Query: 191 MGLITHDKKDSTGICFIGERKFTEFLGNYLPAQPGNIETADGEVIGTHQGLMYHTLGQRK 250
           + L+T  KKDSTGICFIGERKF +FLG YLPAQPG I + DG+ +G HQGLMYHTLGQRK
Sbjct: 186 LDLVTAKKKDSTGICFIGERKFRDFLGRYLPAQPGPIVSVDGQTVGEHQGLMYHTLGQRK 245

Query: 251 GLGIGGMKNSNDDPWYVVDKDLKRNVLVVGQGGHHPRLMSNGMLVNQLHWVDRKGPINGS 310
           GLGIGGMK+S++DPWYVVDKD+  NVLVV QG  HPRLMS G++  QLHWVDR  P++G 
Sbjct: 246 GLGIGGMKDSSEDPWYVVDKDVANNVLVVAQGHEHPRLMSVGLVAQQLHWVDRL-PLSGP 304

Query: 311 -QIVVKTRYRQQDIPCTLTYLDDNTLKVVFDEPVAAVTPGQSAVFYDGEVCLGGGIIDQL 369
            +  VKTRYRQQDIPCT+T LD   ++V FDEPVAAVTPGQSAVFY  E+CLGGGII+Q 
Sbjct: 305 FRCTVKTRYRQQDIPCTVTPLDQERIEVRFDEPVAAVTPGQSAVFYQDEICLGGGIIEQR 364

Query: 370 IR 371
           ++
Sbjct: 365 LQ 366