Pairwise Alignments

Query, 372 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 368 a.a., tRNA-specific 2-thiouridylase MnmA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  566 bits (1459), Expect = e-166
 Identities = 274/359 (76%), Positives = 311/359 (86%), Gaps = 3/359 (0%)

Query: 11  KKVIVGMSGGVDSSVSAYLLMQQGYQVEGLFMKNWEEDDNDEYCAAAEDLKDAQAVCDKL 70
           KKVIVGMSGGVDSSVSA+LL QQGYQVEGLFMKNWEEDD +EYC AA DL DAQAVCDKL
Sbjct: 6   KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65

Query: 71  GIKLHTVNFAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLEFADDILDADYIA 130
           GI+LHTVNFAAEYWDNVFE FL EYKAGRTPNPDI+CNKEIKFKAFLEFA + L ADYIA
Sbjct: 66  GIELHTVNFAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125

Query: 131 MGHYVRRRDNEDGTTQMLRGVDNNKDQSYFLYTLSHEQVARSLFPVGELEKHEVREIAKQ 190
            GHYVRR D  +G +++LRG+D NKDQSYFLYTL HEQ+A+SLFPVGELEK +VR+IA+ 
Sbjct: 126 TGHYVRRAD-VNGKSRLLRGLDGNKDQSYFLYTLGHEQIAQSLFPVGELEKPQVRKIAED 184

Query: 191 MGLITHDKKDSTGICFIGERKFTEFLGNYLPAQPGNIETADGEVIGTHQGLMYHTLGQRK 250
           +GL+T  KKDSTGICFIGERKF +FLG YLPAQPG I T DG+ IG HQGLMYHTLGQRK
Sbjct: 185 LGLVTAKKKDSTGICFIGERKFRDFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRK 244

Query: 251 GLGIGGMKNSNDDPWYVVDKDLKRNVLVVGQGGHHPRLMSNGMLVNQLHWVDRKGPINGS 310
           GLGIGG K+ ++DPWYVVDKD++ NVL+V QG  HPRLMS G++  QLHWVDR+ P  G+
Sbjct: 245 GLGIGGTKDGSEDPWYVVDKDVENNVLIVAQGHEHPRLMSVGLIAQQLHWVDRE-PFTGT 303

Query: 311 -QIVVKTRYRQQDIPCTLTYLDDNTLKVVFDEPVAAVTPGQSAVFYDGEVCLGGGIIDQ 368
            +  VKTRYRQ DIPCT+  L+D+ ++V+FDEPVAAVTPGQSAVFY GEVCLGGGII+Q
Sbjct: 304 LRCTVKTRYRQTDIPCTINALNDDRIEVIFDEPVAAVTPGQSAVFYSGEVCLGGGIIEQ 362