Pairwise Alignments

Query, 372 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 367 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase from Kangiella aquimarina DSM 16071

 Score =  523 bits (1348), Expect = e-153
 Identities = 255/371 (68%), Positives = 303/371 (81%), Gaps = 4/371 (1%)

Query: 1   MTSIEPTHTGKKVIVGMSGGVDSSVSAYLLMQQGYQVEGLFMKNWEEDDNDEYCAAAEDL 60
           MT   P +T   VIVGMSGGVDSSVSAYLL QQGYQVEGLFMKNWEEDD DEYC+AAEDL
Sbjct: 1   MTEKAPENT--HVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDTDEYCSAAEDL 58

Query: 61  KDAQAVCDKLGIKLHTVNFAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLEFA 120
            DAQAVCDKLGIKL TVNFAAEYWD VFEYFL EYKAGRTPNPDIMCNKEIKFKAFL++A
Sbjct: 59  ADAQAVCDKLGIKLKTVNFAAEYWDRVFEYFLEEYKAGRTPNPDIMCNKEIKFKAFLDYA 118

Query: 121 DDILDADYIAMGHYVRRRDNEDGTTQMLRGVDNNKDQSYFLYTLSHEQVARSLFPVGELE 180
             +L ADYIA GHYVRR ++ +G   +LRG+D+NKDQSYFLY +SH+++A++LFPVG++ 
Sbjct: 119 Q-LLGADYIATGHYVRRGES-NGKATLLRGLDSNKDQSYFLYAVSHDKIAKTLFPVGKIA 176

Query: 181 KHEVREIAKQMGLITHDKKDSTGICFIGERKFTEFLGNYLPAQPGNIETADGEVIGTHQG 240
           K EVR+IA++ GL+T  KKDSTGICFIGERKFT+FL  YLPAQPGNIET +GEVIG H G
Sbjct: 177 KPEVRKIAEEQGLVTAKKKDSTGICFIGERKFTDFLQQYLPAQPGNIETPEGEVIGQHNG 236

Query: 241 LMYHTLGQRKGLGIGGMKNSNDDPWYVVDKDLKRNVLVVGQGGHHPRLMSNGMLVNQLHW 300
           LMYHTLGQRKGLGIGG ++++++PW+ +DKDL+RNVL+VGQG  HP LMS+ ++ N+L W
Sbjct: 237 LMYHTLGQRKGLGIGGRQDASEEPWFTLDKDLERNVLIVGQGHEHPLLMSHSLVANKLDW 296

Query: 301 VDRKGPINGSQIVVKTRYRQQDIPCTLTYLDDNTLKVVFDEPVAAVTPGQSAVFYDGEVC 360
           V  + P +  +   KTRYRQ D+ CT   L++    V FD+   AVTPGQS VFY  EVC
Sbjct: 297 VAGEAPSDEFRCTAKTRYRQDDVACTAKRLNETEWLVEFDDKQRAVTPGQSVVFYQDEVC 356

Query: 361 LGGGIIDQLIR 371
           LGGGII ++ R
Sbjct: 357 LGGGIIKEIKR 367