Pairwise Alignments

Query, 372 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 370 a.a., tRNA 2-thiouridine(34) synthase MnmA from Dickeya dianthicola ME23

 Score =  555 bits (1429), Expect = e-163
 Identities = 272/362 (75%), Positives = 307/362 (84%), Gaps = 2/362 (0%)

Query: 11  KKVIVGMSGGVDSSVSAYLLMQQGYQVEGLFMKNWEEDDNDEYCAAAEDLKDAQAVCDKL 70
           KKVIVGMSGGVDSSVSAYLL QQGY+VEGLFMKNWEEDD+ EYC+AA DL DAQAVCDKL
Sbjct: 7   KKVIVGMSGGVDSSVSAYLLQQQGYRVEGLFMKNWEEDDDTEYCSAATDLADAQAVCDKL 66

Query: 71  GIKLHTVNFAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLEFADDILDADYIA 130
           GI+LHTVNFAAEYWDNVFE+FLAEY+AGRTPNPDI+CNKEIKFKAFLEFA + L ADYIA
Sbjct: 67  GIELHTVNFAAEYWDNVFEHFLAEYRAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 126

Query: 131 MGHYVRRRDNEDGTTQMLRGVDNNKDQSYFLYTLSHEQVARSLFPVGELEKHEVREIAKQ 190
            GHYVRR+D  DG +++LRG+D NKDQSYFLYTLSH+Q+A+SLFPVGELEK +VR+IA+Q
Sbjct: 127 TGHYVRRKD-VDGKSRLLRGLDGNKDQSYFLYTLSHQQLAQSLFPVGELEKPQVRQIAEQ 185

Query: 191 MGLITHDKKDSTGICFIGERKFTEFLGNYLPAQPGNI-ETADGEVIGTHQGLMYHTLGQR 249
           + L T  KKDSTGICFIGERKF +FL  YLPAQPG I    DG+V+G HQGLMYHTLGQR
Sbjct: 186 LDLATARKKDSTGICFIGERKFRDFLARYLPAQPGPILSVDDGKVMGEHQGLMYHTLGQR 245

Query: 250 KGLGIGGMKNSNDDPWYVVDKDLKRNVLVVGQGGHHPRLMSNGMLVNQLHWVDRKGPING 309
           KGLGIGG+K   DDPWYVVDKD+  NVL V QG  HPRLMS G++  QLHWVDR+     
Sbjct: 246 KGLGIGGVKEGGDDPWYVVDKDVAGNVLYVAQGHEHPRLMSVGLIAQQLHWVDREPLTQP 305

Query: 310 SQIVVKTRYRQQDIPCTLTYLDDNTLKVVFDEPVAAVTPGQSAVFYDGEVCLGGGIIDQL 369
            +  VKTRYRQ DIPC LT LD + + V FDEPVAAVTPGQSAVFY GE+CLGGGII++ 
Sbjct: 306 LRCTVKTRYRQADIPCLLTPLDADRIDVRFDEPVAAVTPGQSAVFYQGEICLGGGIIEER 365

Query: 370 IR 371
           +R
Sbjct: 366 LR 367