Pairwise Alignments

Query, 372 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 368 a.a., tRNA(Gln,Lys,Glu) U34 2-thiouridylase from Escherichia coli BL21

 Score =  575 bits (1481), Expect = e-169
 Identities = 277/362 (76%), Positives = 312/362 (86%), Gaps = 1/362 (0%)

Query: 7   THTGKKVIVGMSGGVDSSVSAYLLMQQGYQVEGLFMKNWEEDDNDEYCAAAEDLKDAQAV 66
           + T KKVIVGMSGGVDSSVSA+LL QQGYQVEGLFMKNWEEDD +EYC AA DL DAQAV
Sbjct: 2   SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAV 61

Query: 67  CDKLGIKLHTVNFAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLEFADDILDA 126
           CDKLGI+LHTVNFAAEYWDNVFE FLAEYKAGRTPNPDI+CNKEIKFKAFLEFA + L A
Sbjct: 62  CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121

Query: 127 DYIAMGHYVRRRDNEDGTTQMLRGVDNNKDQSYFLYTLSHEQVARSLFPVGELEKHEVRE 186
           DYIA GHYVRR D  DG +++LRG+D+NKDQSYFLYTLSHEQ+A+SLFPVGELEK +VR+
Sbjct: 122 DYIATGHYVRRAD-VDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180

Query: 187 IAKQMGLITHDKKDSTGICFIGERKFTEFLGNYLPAQPGNIETADGEVIGTHQGLMYHTL 246
           IA+ +GL+T  KKDSTGICFIGERKF EFLG YLPAQPG I T DG+ IG HQGLMYHTL
Sbjct: 181 IAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTL 240

Query: 247 GQRKGLGIGGMKNSNDDPWYVVDKDLKRNVLVVGQGGHHPRLMSNGMLVNQLHWVDRKGP 306
           GQRKGLGIGG K   ++PWYVVDKD++ N+LVV QG  HPRLMS G++  QLHWVDR+  
Sbjct: 241 GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF 300

Query: 307 INGSQIVVKTRYRQQDIPCTLTYLDDNTLKVVFDEPVAAVTPGQSAVFYDGEVCLGGGII 366
               +  VKTRYRQ DIPCT+  LDD+ ++V+FDEPVAAVTPGQSAVFY+GEVCLGGGII
Sbjct: 301 TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360

Query: 367 DQ 368
           +Q
Sbjct: 361 EQ 362