Pairwise Alignments

Query, 318 a.a., DNA polymerase III, delta prime subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 328 a.a., DNA polymerase III subunit delta' from Pseudomonas putida KT2440

 Score =  125 bits (314), Expect = 1e-33
 Identities = 85/232 (36%), Positives = 118/232 (50%), Gaps = 11/232 (4%)

Query: 13  PWLDVPRQAFLTQLQTQ-KVPHAQLVGIDSAYGGELLSVFMARAAMCSQPTHTGGCGFCK 71
           PW    +QA   QL  + +  HA L+      G   ++  +    +C QP     CG CK
Sbjct: 6   PW----QQALWQQLAGRSRHAHAYLLHGPQGIGKRAMAERLMARLLCQQPQGLDACGACK 61

Query: 72  SCQLFDAGNHPDFYQIEAD--GHQIKVDQIRELCSRLSATAQQSGRRVAIIHHSERLNSA 129
           SC L  AG+HPD + +E +     IKVDQ+REL + +  TAQ  GR+V +I   E +N  
Sbjct: 62  SCLLLKAGSHPDNFVLEPEEADKPIKVDQVRELVAFVVQTAQLGGRKVVLIEPVEAMNVN 121

Query: 130 SANALLKTLEEPGKDTLLLLHSDTPARLMATISSRCQRLPFVAPSKTLIKNWL---IQQC 186
           ++NALLK+LEEP  DT+LLL +  P+RL+ TI SRCQ++    PS    + WL   +  C
Sbjct: 122 ASNALLKSLEEPSGDTVLLLVTHQPSRLLPTIKSRCQQVACPQPSLAQSQAWLAGALPDC 181

Query: 187 QIQEDVTWCLSVVGGPLKLAESLQSNSTQPSRYQTLLGFRKDWAQSLSSGHL 238
              E         G PL +A SLQ+   +  R     G +K   Q  S   L
Sbjct: 182 DEVERDELLTLAAGSPL-MAVSLQAQGVREQRALVTDGVKKLLKQQQSPSQL 232