Pairwise Alignments

Query, 318 a.a., DNA polymerase III, delta prime subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 363 a.a., DNA polymerase III subunit delta' from Magnetospirillum magneticum AMB-1

 Score = 72.4 bits (176), Expect = 2e-17
 Identities = 56/185 (30%), Positives = 87/185 (47%), Gaps = 21/185 (11%)

Query: 21  AFLTQLQTQKVPHAQLVGIDSAYGGELLSVFMARAAMCSQPTHTGGCGFCKSCQLFDAGN 80
           A L    + ++ HA L+      G   L+   AR A+       G  G   S  L    +
Sbjct: 22  ALLDAWNSGRLAHAWLLCGPKGIGKATLAYRFARFALAGGGDGGGLFGDVPS-SLEIRPD 80

Query: 81  HPDFYQIEADGH--------------------QIKVDQIRELCSRLSATAQQSGRRVAII 120
           HP F +I + GH                    +I V+ +R +   +S T  + G RV II
Sbjct: 81  HPVFRRIASQGHADLETVERGWADDKKSKLRSEIVVEDVRGIGHFMSLTPAEGGWRVVII 140

Query: 121 HHSERLNSASANALLKTLEEPGKDTLLLLHSDTPARLMATISSRCQRLPFVAPSKTLIKN 180
             ++ +N  +ANA+LK LEEP ++ L+LL S +P RL+ TI SRC+RL      + ++ +
Sbjct: 141 DSADEMNRNAANAVLKVLEEPPRNALMLLISHSPGRLLPTIRSRCRRLMLQPLGEDVVAD 200

Query: 181 WLIQQ 185
            L +Q
Sbjct: 201 LLTRQ 205