Pairwise Alignments

Query, 318 a.a., DNA polymerase III, delta prime subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 332 a.a., DNA polymerase III, delta' subunit from Kangiella aquimarina DSM 16071

 Score =  107 bits (268), Expect = 3e-28
 Identities = 63/163 (38%), Positives = 90/163 (55%), Gaps = 3/163 (1%)

Query: 25  QLQTQKVPHAQLVGIDSAYGGELLSVFMARAAMCSQPTHTGGCGFCKSCQLFDAGNHPDF 84
           Q Q   +PHA L+      G E  +  +A+  +C        CG CKSC LF+AGNHPD+
Sbjct: 18  QFQQGSLPHAILLMGPEGIGRETFAESLAQWLLCLNRQQEA-CGECKSCFLFEAGNHPDY 76

Query: 85  Y--QIEADGHQIKVDQIRELCSRLSATAQQSGRRVAIIHHSERLNSASANALLKTLEEPG 142
           +   +E D  QI V Q+REL   +  ++ Q G +VA I + + +N++S NALLKTLEEP 
Sbjct: 77  HLLDVEQDKTQISVGQVRELIVSMQESSHQGGWKVANIANVQAMNASSFNALLKTLEEPQ 136

Query: 143 KDTLLLLHSDTPARLMATISSRCQRLPFVAPSKTLIKNWLIQQ 185
            +TLL+L +     +  TI SR Q L         +K WL ++
Sbjct: 137 DNTLLILQTSQLQGVPPTIRSRAQLLSLSVDDHKQVKEWLTER 179