Pairwise Alignments

Query, 318 a.a., DNA polymerase III, delta prime subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 336 a.a., DNA polymerase III subunit delta' from Dickeya dianthicola ME23

 Score =  119 bits (297), Expect = 1e-31
 Identities = 89/284 (31%), Positives = 129/284 (45%), Gaps = 23/284 (8%)

Query: 13  PWLDVPRQAFLTQLQTQKVPHAQLVGIDSAYGGELLSVFMARAAMCSQPTHTGGCGFCKS 72
           PWL+ P +  L   Q ++  HA L+      G   L    +R  +C QP     CG C S
Sbjct: 5   PWLNAPYRQLLASHQAERGHHALLLHAIDGMGDASLVYAFSRWLLCQQPDGAKSCGRCHS 64

Query: 73  CQLFDAGNHPDFYQI--EADGHQIKVDQIRELCSRLSATAQQSGRRVAIIHHSERLNSAS 130
           C L  AG HPD++ +  E   H + VD +R +   +   ++Q G +V  +  +E L  A+
Sbjct: 65  CGLMSAGTHPDWHTLSPEKGKHSLGVDAVRGVLEPVYQRSRQGGAKVVWLPQAESLTEAA 124

Query: 131 ANALLKTLEEPGKDTLLLLHSDTPARLMATISSRCQRLPFVAPSKTLIKNWLIQQCQIQE 190
           ANALLKTLEEP   T  LL    P RL+AT+ SRC  L    P++     WL  +    +
Sbjct: 125 ANALLKTLEEPPAQTYFLLGCREPGRLLATMRSRCLHLHLDVPAEPQGMQWLRGRGHYDD 184

Query: 191 -DVTWCLSVVGGPLKLAESLQSNSTQPSRYQTLLGFRKDWAQSLSSGHLCASLLIISEQQ 249
             +   L +  G    AE+L     QP  ++      +   QSL SG   A L +++   
Sbjct: 185 LALQTALRLAAGAPLAAEAL----LQPDNWKARQAVCQQLGQSLQSGDALALLPVLNHDD 240

Query: 250 -----------IIDALKVLYLLLRQILLKNGNQD-AYVQAQIGN 281
                       +DALK  Y    Q   +  NQD A + AQ+ +
Sbjct: 241 ADRRLHWVSTLFLDALKWRY----QAADQRTNQDQAALVAQLAS 280