Pairwise Alignments

Query, 869 a.a., PqiB family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 766 a.a., paraquat-inducible protein B from Pseudomonas putida KT2440

 Score =  318 bits (814), Expect = 1e-90
 Identities = 214/694 (30%), Positives = 353/694 (50%), Gaps = 46/694 (6%)

Query: 6   FSPIWLLPIVALALGAWLGIKSIKESGVEIQIHFPSATGIDVGKTLVKYQGLTVGKVKDI 65
           +S IW+LP++AL +G WL  ++ +++GVEI++ F S  GI   KT V Y+G+ VGKVK +
Sbjct: 15  WSAIWILPLIALMIGGWLAWQAYRDAGVEIEVRFESGEGIVANKTEVIYKGMPVGKVKSL 74

Query: 66  GID--DDLKGVNVKVMMDYRAKPFLNKETLFWLVTPKASITGVEGLDALFSGNYIAIQPG 123
            +D   D +GV   + M+  A+P L K T FWLV P  S+ G+ GL+ L SGNYIA+ PG
Sbjct: 75  VLDAKGDTQGVIATIEMNKAAEPHLTKGTRFWLVKPSVSLAGISGLETLVSGNYIAVSPG 134

Query: 124 KGNAATFFEAERQPPPMQIGSEGVMIELTADKLGSLDVGSPVFFRQIPVGSVVSYRL-DG 182
           +G     F A +  PP+     G+ + L AD+LGSL+  SPVF++QI VG V SYRL + 
Sbjct: 135 EGERTKRFVALKVAPPLSDSEPGLHLTLKADRLGSLNRDSPVFYKQIQVGRVKSYRLSED 194

Query: 183 NARVIISAFIQEQYARLVKKNSHFWNVSGVKVDASLAGIKVNTESLASILAGGVSFSSDE 242
            + V +  FI+  YA LV+K++ FWN SGV +DASL+G+KV +ESL+SI+AGG++F++ E
Sbjct: 195 QSTVEVKVFIEPAYASLVRKHTRFWNASGVSIDASLSGVKVRSESLSSIVAGGIAFATPE 254

Query: 243 KAAAAQNGD---SFALYDSETSALGGVEVSLTMNDGNGIDKG-TRIVYRGISVGSIQSKN 298
               +   D    F LY+   +A  G+ V + ++D  G+  G T ++Y+GI VGS+++  
Sbjct: 255 YRKDSPPTDPSLPFRLYEDFDAAQAGIRVKVKLSDYEGLQAGRTPVMYKGIQVGSLKALK 314

Query: 299 LTTTGVTAIAK--FEPEYANLLTSDGRFWLEGADISLSGIKNPERLLTGSVINFLPGTNA 356
           +     +A A+   +P   + L    +FW+    ISL+GI   E L+ G+ I   PG   
Sbjct: 315 MEDNLASASAELTLDPLTEDYLVDGTQFWVVKPSISLAGITGLEALVKGNYIAIRPGEKG 374

Query: 357 NTALPS-SFALQSSAPDLLQAKKRLLTITSAENMG-LTAGAEVRYKQLPIGQVLAVKLTK 414
             A P   F  ++ AP L      L  +  A+ +G L  G+ V Y+Q+ +G V + +  +
Sbjct: 375 --ARPEREFEARAKAPPLDLKAPGLHMVLFADTLGSLEIGSPVTYRQVKVGSVQSYQFAR 432

Query: 415 DLSAVEYQLELQPEFASLVRSDSYFIPESALSVDASIEGVSVKTRDLATLTKGAVSLIPG 474
           + + +   + ++ E+  LV   S F   S +++   + G+ +K+  L TL  G ++    
Sbjct: 433 NSNRILIGVHIEKEYEKLVNGSSRFWNVSGITLTGGLSGIKIKSESLQTLMAGGIAFDTP 492

Query: 475 SNNTPVAAN-ARLSLFSSVEEAKQFFERQQRLYFTLTSQDGADVSQGSPIYYKKMQIGRV 533
             + P+  +  R  L  S E        +     T+       +  G+ I ++ + +G +
Sbjct: 493 RPDVPLKRHIPRFRLHDSQEAV-----NRAGTLITIRVDRADGLKPGTAIRFRGLDVGSI 547

Query: 534 ESVNWQSKTEDFAIKIAIDKQFQPLMQKPKVFWRNSALDVSASLAGIDVAVAPLQGALKG 593
           ESV+     +   ++  I +    + +    FW                 V P  G ++ 
Sbjct: 548 ESVDLTDDLQAVLLRARITESADRIARAGTQFW----------------VVKPALGLVRT 591

Query: 594 SISLGLLENPLAD--PTASLKLYENKQLALAQAQAIR-------LTLSASAKLAAK--AA 642
                L+     +  P A  +  +   +ALA+A  +        LTLSA  + + K    
Sbjct: 592 ENLDTLIGGQYLEVQPAAKNRGPQRDFIALAEAPEVAGPEVGLPLTLSAPRRGSIKPGVP 651

Query: 643 IRYQGHQVGEVTQVKLNADLNTLSATAYLYGEYA 676
           + Y+   VG+VT  +L    + +     +   YA
Sbjct: 652 VTYREVTVGKVTGFELGQSADRVLIHILIEPRYA 685



 Score =  222 bits (565), Expect = 8e-62
 Identities = 190/722 (26%), Positives = 329/722 (45%), Gaps = 41/722 (5%)

Query: 165 VFFRQIPVGSVVSYRLD--GNARVIISAFIQEQYARL-VKKNSHFWNVSGVKVDASLAGI 221
           V ++ +PVG V S  LD  G+ + +I+     + A   + K + FW V   K   SLAGI
Sbjct: 61  VIYKGMPVGKVKSLVLDAKGDTQGVIATIEMNKAAEPHLTKGTRFWLV---KPSVSLAGI 117

Query: 222 KVNTESLASILAGGVSFSSDEKAAAAQNGDSFALYDSETSALGGVEVSLTMNDGNGIDKG 281
                 L ++++G     S  +    +   +  +    + +  G+ ++L  +    +++ 
Sbjct: 118 S----GLETLVSGNYIAVSPGEGERTKRFVALKVAPPLSDSEPGLHLTLKADRLGSLNRD 173

Query: 282 TRIVYRGISVGSIQSKNLTTTGVTAIAK--FEPEYANLLTSDGRFWLEGA---DISLSGI 336
           + + Y+ I VG ++S  L+    T   K   EP YA+L+    RFW       D SLSG+
Sbjct: 174 SPVFYKQIQVGRVKSYRLSEDQSTVEVKVFIEPAYASLVRKHTRFWNASGVSIDASLSGV 233

Query: 337 KNPERLLTGSV---INFLPGTNANTALPSSFALQSSAP---DLLQAKKRLLTITSAENMG 390
           K     L+  V   I F        + P+  +L        D  QA  R+  +  ++  G
Sbjct: 234 KVRSESLSSIVAGGIAFATPEYRKDSPPTDPSLPFRLYEDFDAAQAGIRV-KVKLSDYEG 292

Query: 391 LTAG-AEVRYKQLPIGQVLAVKLTKDLSAVEYQLELQPEFAS-LVRSDSYFIPESALSVD 448
           L AG   V YK + +G + A+K+  +L++   +L L P     LV    +++ + ++S+ 
Sbjct: 293 LQAGRTPVMYKGIQVGSLKALKMEDNLASASAELTLDPLTEDYLVDGTQFWVVKPSISL- 351

Query: 449 ASIEGVSVKTRDLATLTKGA-VSLIPGSNNTPVAANARLSLFSSVEEAKQFFERQQRLYF 507
           A I G       L  L KG  +++ PG              F +  +A     +   L+ 
Sbjct: 352 AGITG-------LEALVKGNYIAIRPGEKGARPERE-----FEARAKAPPLDLKAPGLHM 399

Query: 508 TLTSQDGADVSQGSPIYYKKMQIGRVESVNWQSKTEDFAIKIAIDKQFQPLMQKPKVFWR 567
            L +     +  GSP+ Y+++++G V+S  +   +    I + I+K+++ L+     FW 
Sbjct: 400 VLFADTLGSLEIGSPVTYRQVKVGSVQSYQFARNSNRILIGVHIEKEYEKLVNGSSRFWN 459

Query: 568 NSALDVSASLAGIDVAVAPLQGALKGSISLGLL--ENPLADPTASLKLYENKQLALAQAQ 625
            S + ++  L+GI +    LQ  + G I+      + PL       +L+++++       
Sbjct: 460 VSGITLTGGLSGIKIKSESLQTLMAGGIAFDTPRPDVPLKRHIPRFRLHDSQEAVNRAGT 519

Query: 626 AIRLTLSASAKLAAKAAIRYQGHQVGEVTQVKLNADLNTLSATAYLYGEYADHFSSSDAE 685
            I + +  +  L    AIR++G  VG +  V L  DL  +   A +  E AD  + +  +
Sbjct: 520 LITIRVDRADGLKPGTAIRFRGLDVGSIESVDLTDDLQAVLLRARIT-ESADRIARAGTQ 578

Query: 686 YHMVEAQISLAGIKAPETLITGPYIGVLPGKSKQKATQFQAKLVESSYANVAEDALKFTL 745
           + +V+  + L   +  +TLI G Y+ V P    +   +    L E+      E  L  TL
Sbjct: 579 FWVVKPALGLVRTENLDTLIGGQYLEVQPAAKNRGPQRDFIALAEAPEVAGPEVGLPLTL 638

Query: 746 EDSNLGSMKVGTPIFFRGLKVGQIDGYSLSSQGNSVLMQAHIEPQYRHLVNKTSQFWDAS 805
                GS+K G P+ +R + VG++ G+ L    + VL+   IEP+Y  LV   S+FW++S
Sbjct: 639 SAPRRGSIKPGVPVTYREVTVGKVTGFELGQSADRVLIHILIEPRYAALVRSGSRFWNSS 698

Query: 806 GIKVDVGIFSGAQIEAGSLETLLAGGINVATKETTQANNRLSQGAVITLQHKAQTEWQEW 865
           G   D G+F GA +   S+ETL+ GGI  AT +  Q  N         L  KA+ EW +W
Sbjct: 699 GFGFDWGLFKGATVRTESVETLIDGGIAFATPDGEQMGNPARPQQTFALFEKAEDEWLQW 758

Query: 866 AP 867
           AP
Sbjct: 759 AP 760