Pairwise Alignments

Query, 682 a.a., carboxyl-terminal protease (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 438 a.a., peptidase S41 from Pseudomonas simiae WCS417

 Score =  120 bits (300), Expect = 2e-31
 Identities = 105/376 (27%), Positives = 181/376 (48%), Gaps = 44/376 (11%)

Query: 183 KKWLEIVDILQKRYNNAIKRLTQTNSEDVFQAVMNAFSRSIEPHTSYLSPRNAERFQMEM 242
           + + E++D ++  Y   +      + + + +  +     +++PH++YL P +    Q   
Sbjct: 50  RTFAEVMDRIKAAYVEPV------DDKTLLENAIKGMLSNLDPHSAYLGPEDFAELQEST 103

Query: 243 NLSLEGIGAQLQLEDDYTVIKSLIAGGPAAGSEKLSPEDKIVGVGQEGGEIVDVIGWRLD 302
           +    G+G ++  ED    + S I   PA+ +  +   D IV +  +        G  + 
Sbjct: 104 SGEFGGLGIEVGSEDGNIKVVSPIDDTPASKAG-IQAGDFIVKINGQPTR-----GQTMT 157

Query: 303 DVVELIKGPKGSKVVLQILPKKGGSNAKPFNVTLVRDKIRLEDRAATSKIIEPKDGVYAN 362
           + V+ ++G  G K+ L ++ + GG+   PF+VTL R  I +  ++  S+++E        
Sbjct: 158 EAVDKMRGKIGQKITLTLV-RDGGN---PFDVTLTRATILV--KSVKSQLLESG------ 205

Query: 363 RKVGVIQIPGFYMNLSQDVEKELLKL---NEAKVEGVVIDLRGNGGGALTEAVLLTGLFI 419
              G I+I  F +    +V K L KL   N  K+ G+V+DLR N GG L  AV +   FI
Sbjct: 206 --YGYIRITQFQVKTGDEVAKALAKLRKDNGKKLNGIVLDLRNNPGGVLQSAVEVVDHFI 263

Query: 420 DMGPVV----QVRDADGRVSAHRDNDGKTTYTGPLTVMVDRYSASASEIFAAALQDYDRA 475
             G +V    ++ +++ R SA  ++  +     PL V+++  SASASEI A ALQD  R 
Sbjct: 264 TKGLIVYTKGRIANSELRFSATGNDLSENV---PLAVLINGGSASASEIVAGALQDQKRG 320

Query: 476 LIVGESSFGKGTVQQHKSLGRIYDMYEKPIGHVQYTIQKFYRINGGSTQLKGVTPNIAYP 535
           +++G +SFGKG+VQ    L       E+ +   + T   +Y  NG S Q +G+ P+I   
Sbjct: 321 VLMGTTSFGKGSVQTVLPLNN-----ERAL---KITTALYYTPNGRSIQAQGIVPDIEVR 372

Query: 536 SALEPGEYGEAEEKNA 551
            A    E      K A
Sbjct: 373 KAKITNEIDSEYYKEA 388