Pairwise Alignments

Query, 682 a.a., carboxyl-terminal protease (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 682 a.a., C-terminal peptidase (prc) from Enterobacter asburiae PDN3

 Score =  669 bits (1727), Expect = 0.0
 Identities = 365/683 (53%), Positives = 457/683 (66%), Gaps = 21/683 (3%)

Query: 2   MRKLILATSIATVF-VGFSAWAVPPTIQISELPTLKQEAQHKVASKRVTDLYTRSHYHRF 60
           M      T++A +F +   A+AV    ++ ++P LK+E QH   S+RVT  +TRSHY +F
Sbjct: 1   MNTFFKLTALAGLFAITGHAFAVDDITRVDQIPVLKEETQHATVSERVTSRFTRSHYRQF 60

Query: 61  ALDDAFSAQIFDRYLQQLDYRRNVLTQADVDSFKPYINQFDDMLSSGELDPAYKMFDLVQ 120
            LD AFSA+IFDRYL  LDY  NVL  +DV+ F    ++  D L SG+LD  Y +++L Q
Sbjct: 61  DLDQAFSAKIFDRYLNLLDYSHNVLLASDVEQFAKRKSEVGDELRSGKLDLFYDLYNLSQ 120

Query: 121 KRRYEGFVYALSLLDKEMDFTAPGDVYDYDREDVAWPKDQAEINELWRQRVKYDALNLKL 180
           KRR+E + YAL +L++ MDFT   D ++ DR    WPKD+AE+N LW  +VKYD L+LKL
Sbjct: 121 KRRFERYQYALKVLERPMDFTG-SDTFNLDRSKAPWPKDEAELNALWDGKVKYDELSLKL 179

Query: 181 TGKKWLEIVDILQKRYNNAIKRLTQTNSEDVFQAVMNAFSRSIEPHTSYLSPRNAERFQM 240
           TGK   EI D L +RY  AI+RL QTNSEDVF   M AF+  I+PHT+YLSPRN E+F  
Sbjct: 180 TGKDEKEIRDTLTRRYKFAIRRLAQTNSEDVFSLAMTAFAHEIDPHTNYLSPRNTEQFNT 239

Query: 241 EMNLSLEGIGAQLQLEDDYTVIKSLIAGGPAAGSEKLSPEDKIVGVGQEGGEIVDVIGWR 300
           EM+LSLEGIGA LQ++DDYTVI S++AGGPA+ S+ +S  D+IVGVGQ G  +VDVIGWR
Sbjct: 240 EMSLSLEGIGAVLQMDDDYTVINSMVAGGPASKSKAISVGDRIVGVGQTGQNMVDVIGWR 299

Query: 301 LDDVVELIKGPKGSKVVLQILPKKGGSNAKPFNVTLVRDKIRLEDRAATSKIIEPKDGVY 360
           LDDVV LIKGPKGSKV L+ILP   G   K   VTL R++IRLEDRA    +        
Sbjct: 300 LDDVVALIKGPKGSKVRLEILP--AGKGTKTRIVTLTRERIRLEDRAVKMSV-----KTV 352

Query: 361 ANRKVGVIQIPGFYMNLSQDVEKELLKLNEAKVEGVVIDLRGNGGGALTEAVLLTGLFID 420
              KVGV+ IPGFY+ L+ DV+ +L KL +  V  ++IDLR NGGGALTEAV L+GLFI 
Sbjct: 353 GKEKVGVLDIPGFYVGLTDDVKVQLQKLEKQNVSSIIIDLRSNGGGALTEAVSLSGLFIP 412

Query: 421 MGPVVQVRDADGRVSAHRDNDGKTTYTGPLTVMVDRYSASASEIFAAALQDYDRALIVGE 480
            GPVVQVRD +G+V    DNDG   Y GPL V+VDR+SASASEIFAAA+QDY RALIVGE
Sbjct: 413 SGPVVQVRDNNGKVREDADNDGVVYYKGPLVVLVDRFSASASEIFAAAMQDYGRALIVGE 472

Query: 481 SSFGKGTVQQHKSLGRIYDMYEKP----IGHVQYTIQKFYRINGGSTQLKGVTPNIAYPS 536
            +FGKGTVQQ++SL RIYD   +P    +G VQYTIQKFYR+NGGSTQ KGVTP+I  P+
Sbjct: 473 PTFGKGTVQQYRSLNRIYDQMLRPEWPALGSVQYTIQKFYRVNGGSTQRKGVTPDIMMPT 532

Query: 537 ALEPGEYGEAEEKNALPWDKVPMAQYGTLNDIT---PELVASLEKKHLARIQNSVEFNYI 593
             E  E GE  E NALPWD +  A Y    D+T   PEL+    K H  RI    EF YI
Sbjct: 533 GTEETETGEKFEDNALPWDSINAATYVKAGDMTQFGPELL----KAHNDRIAKDPEFQYI 588

Query: 594 NQDIADFKK-HHKEKTVSLVESERIASREADEKKVLDRTNERRVANGLAPVKSMEDIKDD 652
            +DIA F     K   VSL  ++R      D+   L R N+R    G   +K ++D+  D
Sbjct: 589 MKDIARFNALKDKRNIVSLNYAQREKENNEDDATRLARINDRFKREGKPLLKKLDDLPKD 648

Query: 653 VVAPDAFLDETAYITLDMVDAKK 675
              PD +LDET +I LD+ + +K
Sbjct: 649 YQEPDPYLDETVHIALDLANQEK 671