Pairwise Alignments

Query, 336 a.a., BNR repeat protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 374 a.a., YCF48-related protein from Rhodanobacter sp000427505 FW510-R12

 Score =  124 bits (310), Expect = 5e-33
 Identities = 81/260 (31%), Positives = 124/260 (47%), Gaps = 31/260 (11%)

Query: 38  ASSLVLDIAHAGQHLVAVGERGHVLVLTDK---WQQVPTPTSVQLTKVFFLNEKFGWAVG 94
           A  +++    AG  + AVG+ G+++   D+   W++   P S  LT V F + + GW VG
Sbjct: 83  AQLMLIGATRAGTRICAVGDHGYIIYSDDEGKTWRRADAPHSGLLTAVDFPDPQHGWVVG 142

Query: 95  HDATILHTQDGGQTWSLQMQSTEIEKPFLDVLFLNEQEGMAIGAYGLFYRTRDGGANWTE 154
           H   IL T DGG+TW  Q    + E+P  DVLF N++EG A+GAYGL   T+DGG  W +
Sbjct: 143 HAGLILATTDGGRTWIEQRYEPKEEQPLFDVLFRNDREGFAVGAYGLLLVTQDGGRRWQQ 202

Query: 155 EFHEELLAEEDVSYLAELKNSDQAAYLTERASLLPHFNRMIALKDGRLLLVGELGLVAMS 214
                          +  K+ D+            H N +      +L +  E G +  S
Sbjct: 203 R--------------SIGKDIDR------------HLNYITVFGQKQLAIAAESGNLYTS 236

Query: 215 ADKGQSFTRTGFDYDGSMFNAIQLQ-DAVYVMGLRGHVFKADLSLAQWDEIDMPVKSSIN 273
            D GQ +      YDGS F  + +    +   GL GHVF++      W  ++   ++S+ 
Sbjct: 237 NDGGQDWV-DSTPYDGSFFGILDVPGGGLLAYGLLGHVFRSVDGGRNWLRVEGTGQASLM 295

Query: 274 GVMATSETSLYLVGNAGIVI 293
           G +AT   ++ LVG  G V+
Sbjct: 296 GGVATGAGTVVLVGAGGTVL 315



 Score = 26.2 bits (56), Expect = 0.001
 Identities = 20/104 (19%), Positives = 41/104 (39%), Gaps = 3/104 (2%)

Query: 232 MFNAIQLQDAVYVMGLRGHVFKADLSLAQWDEIDMPVKSSINGVMATSETSLYLVGNAGI 291
           +  A +    +  +G  G++  +D     W   D P    +  V        ++VG+AG+
Sbjct: 87  LIGATRAGTRICAVGDHGYIIYSDDEGKTWRRADAPHSGLLTAVDFPDPQHGWVVGHAGL 146

Query: 292 VIQLNQDDSSSIVTR---RQGENLVSIAKDNQGNVWLSGSQGLL 332
           ++       + I  R   ++ + L  +   N    +  G+ GLL
Sbjct: 147 ILATTDGGRTWIEQRYEPKEEQPLFDVLFRNDREGFAVGAYGLL 190