Pairwise Alignments
Query, 1614 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1
Subject, 1621 a.a., NAD-specific glutamate dehydrogenase from Pseudomonas putida KT2440
Score = 1437 bits (3719), Expect = 0.0
Identities = 756/1582 (47%), Positives = 1034/1582 (65%), Gaps = 13/1582 (0%)
Query: 30 QVEQFATCLYAHMSKDDLNARNDSDLYGAVLSLWNALNKTPKGETHLRVFNPSQSKHGWQ 89
QV FA + +S D+L R SDL G LS W + + +RV+NP ++GWQ
Sbjct: 31 QVALFAEQFFGIISLDELTQRRLSDLAGCTLSAWRIIERFDPEYPQVRVYNPDYERNGWQ 90
Query: 90 STHSIIEVIQPDMPFLVDSVGMALNRMGITAHVMLHTPLAIERSAQ-EVTKVTYLNQSPD 148
STH+++EV+ D+PFLVDSV LNR G + H + T L++ R A+ E+ ++ +
Sbjct: 91 STHTVVEVLHHDLPFLVDSVRTELNRRGYSIHTLQTTVLSVRRGAKGELLELLPKGTQGE 150
Query: 149 STEHVAVFLIEIDRQSSTADIKALEREIQSVLADVAASVNDWGAMSAKLSETIKELPKRP 208
+ ++ +EIDR ++ A++ L REI+ VLA+V V D+ M AKL E + ++ +
Sbjct: 151 GVRYESLMYLEIDRCANAAELTVLTREIEQVLAEVRVVVADFEPMKAKLREVVAQVEQTA 210
Query: 209 FPGEKQELEEAINFLTYLNNHHFTLLGYRQYDLKRVEGDVELVPNIASSLGLMNKHHKTQ 268
F + E E FL +L ++HFT LGY ++ +K ++V + S LGL +
Sbjct: 211 FGPAQNEKGEVKAFLEWLLDNHFTFLGYEEFTVKGDADGGQMVYDEQSFLGLPRRLRVGL 270
Query: 269 PEQGLLLSSFSDSARKEALDHSLLILTKSSAKSRVHRPAYVDYIGIKRFDKKGNVIGEDR 328
+ L + ++ + E L LL K++ SRVHRPAY DY+ I++ D G VI E R
Sbjct: 271 TAEELRIEDYAVAYLNEPL---LLSFAKAALPSRVHRPAYPDYVSIRQLDADGKVIKEHR 327
Query: 329 FIGLYASNVYNRSPREIPLLNEKVQRVLDRSGLTPRSHDYKALLNILENLPRDELIQANV 388
F+GLY S+VY S IP + KV V RSG P++H K L +LE LPRD+L Q +
Sbjct: 328 FMGLYTSSVYGESVHAIPYIRVKVAEVERRSGFDPKAHLGKELAQVLEVLPRDDLFQTPI 387
Query: 389 DDLAHTAHGVLEMQDRDKLKLFVRKDGFGRFLSCLVYVSKDRYNTKLRQDTQRILAQHFN 448
D+L T ++++Q+R+K+++F+RKD +GRF CL YV ++ Y+T++RQ Q++L +
Sbjct: 388 DELFSTVMAIVQIQERNKIRVFLRKDPYGRFCYCLAYVPREIYSTEVRQKIQQVLMERLK 447
Query: 449 SKEDVEFTTYFSESTLARTHYIVKVD-NNNMDVDVAAIENNLIEAARSWEDKLNTALNNA 507
+ D EF T+FSES LAR I++VD N +D+D +E +I+A RSW D + +
Sbjct: 448 AS-DCEFWTFFSESVLARVQLILRVDPKNRIDIDPQQLEREVIQACRSWHDDYSALVVEN 506
Query: 508 LGEEAGTHLMKRYANAFEQSYKEDVLPSSAVVDMQQLEALDDEHKLGMLFYQPQEAALND 567
GE GT+++ + F Y+E SAVVD+Q + L + L M FYQP + +
Sbjct: 507 FGEAQGTNILADFPKGFPAGYRERFAAHSAVVDLQHVLNLSESKPLAMSFYQPL-TQVGE 565
Query: 568 NKVRLKLFHKDEPIHLSDVLPMLENFGLRVINERPYEVTTADGSTFWILDFLMTVKVVNT 627
+ KL+H D P+ LSDVLP+LEN GLRV+ E PY + A+G +WI DF T +
Sbjct: 566 RILHCKLYHADTPLALSDVLPILENLGLRVLGEFPYRLRHANGREYWIHDFAFTYSEGLS 625
Query: 628 DNIADSQDRFQTALSQVWQKKLEDDGFNRIILASGLTGREVSVLRAYAKYMRQIDATFSQ 687
+I D Q A + + E+D FNR++L +GL R+V++LRAYA+Y++QI F
Sbjct: 626 LDIQQLNDTLQDAFIHIVRGDAENDAFNRLVLTAGLPWRDVALLRAYARYLKQIRLGFDL 685
Query: 688 AYIEETFGRYPQIADLLVKMFIRKFN--PKLKTRTLG----KFMEQINLRLDEVSSLDDD 741
YI T + IA L ++F +F KL L + + I LD+V L++D
Sbjct: 686 GYIASTLNNHTDIARELTRLFKTRFYLARKLTQDDLDDKQQRLEQAILSALDDVQVLNED 745
Query: 742 RIIRRYLDLINATLRTNFYQLDAKGESKSYISFKFMPSLIPEMPRPLPKFEIFVYSPRVE 801
RI+RRYLDLI ATLRTNFYQ DA G++KSY SFKF P LIPE+P+P+PKFEIFVYSPRVE
Sbjct: 746 RILRRYLDLIKATLRTNFYQPDANGQNKSYFSFKFNPKLIPELPKPVPKFEIFVYSPRVE 805
Query: 802 GVHLRYGKVARGGLRWSDRREDFRTEVLGLVKAQQVKNTVIVPVGAKGGFVCKQLPTEGG 861
GVHLR+G VARGGLRWSDR EDFRTEVLGLVKAQQVKN+VIVPVGAKGGF+ ++LP G
Sbjct: 806 GVHLRFGNVARGGLRWSDREEDFRTEVLGLVKAQQVKNSVIVPVGAKGGFLPRRLPLGGS 865
Query: 862 REAFFTEGQECYRIFIRALLDITDNILNGEIVHPVDVVRHDEDDPYLVVAADKGTATFSD 921
R+ EG CYRIFI LLDITDN+ +G +V P +VVRHD+DDPYLVVAADKGTATFSD
Sbjct: 866 RDEIAAEGVACYRIFISGLLDITDNLKDGGVVPPANVVRHDDDDPYLVVAADKGTATFSD 925
Query: 922 IANSISLEYNFWLGDAFASGGSNGYDHKKMGITAKGGWESVKRHFREVGIDCQTTDFTCL 981
IAN I+++Y FWLGDAFASGGS GYDHKKMGITA+G W V+RHFRE GI+ Q T +
Sbjct: 926 IANGIAIDYGFWLGDAFASGGSAGYDHKKMGITARGAWVGVQRHFRERGINVQEDPITVI 985
Query: 982 GIGDMAGDVFGNGMLLSKHTKLVAAFNHMHIFIDPNPDAATSYEERARLFALPRSSWEDY 1041
G+GDMAGDVFGNG+L+S +LVAAFNH+HIFIDPNPD ATS+ ER RLF LPRS+W DY
Sbjct: 986 GVGDMAGDVFGNGLLMSDKLQLVAAFNHLHIFIDPNPDPATSFAERKRLFDLPRSAWSDY 1045
Query: 1042 NSKLISKGGGVFLRSSKSIPLSAEMKQMLGTEKISMTPTEMMKELLKMPVDLIWNGGIGT 1101
++ ++S+GGG+F RS+KSI +S +MK+ E +TPTE++ LLK PVDL+WNGGIGT
Sbjct: 1046 DTSIMSEGGGIFPRSAKSIAISPQMKERFAIEADRLTPTELLNALLKAPVDLLWNGGIGT 1105
Query: 1102 YVKSSRETNAEVGDRANDALRVNGRELRAKIVGEGGNLGCTQLGRIEYAANGGRINTDFV 1161
YVK+S E++A+VGD+ANDALRVNG ELR K+VGEGGNLG TQLGR+E+ NGG NTDF+
Sbjct: 1106 YVKASTESHADVGDKANDALRVNGNELRCKVVGEGGNLGMTQLGRVEFGLNGGATNTDFI 1165
Query: 1162 DNVGGVDCSDNEVNIKILLNAMVTEGELTLKQRNRLLGEMTEEVGEIVLQDCKDQTRTIS 1221
DN GGVDCSD+EVNIKILLN +V G++T KQRN+LLG MT+EV +VL + QT+ +S
Sbjct: 1166 DNAGGVDCSDHEVNIKILLNEVVQGGDMTEKQRNQLLGSMTDEVAGLVLGNNYKQTQALS 1225
Query: 1222 VTQVRGAEQLKEQIRFIQYLEKEGKLDRALEFLPSEEELTERLANGRALTRPELSVLVAY 1281
+ R E++ E R + LE GKLDRA+EFLPSEE+L ERLA G+ LTR ELSVL++Y
Sbjct: 1226 LAARRARERIAEYKRLMADLEARGKLDRAIEFLPSEEQLAERLAAGQGLTRAELSVLISY 1285
Query: 1282 AKMVLKEQLLTPEITEDTLLSQLLIAYFPKKLQELYSARMVTHPLRGEIIATSLANELVN 1341
+K+ LKEQLL + +D L++ + FP L ++ M H L+ EI++T +AN+LVN
Sbjct: 1286 SKIDLKEQLLKSLVPDDDYLTRDMETAFPPSLVSKFAEAMRRHRLKREIVSTQIANDLVN 1345
Query: 1342 DMGLNFVQRMQDETGASVADAAICYTMAREVFGLAELTKSITDLNGIVPAVVQGEMLHQL 1401
+MG+ FVQR+++ TG S A+ A Y + R++F L + I L+ VPA +Q ++ +L
Sbjct: 1346 NMGITFVQRLKESTGMSPANVAGAYVIVRDIFHLPHWFRQIEALDYQVPAEIQLTLMDEL 1405
Query: 1402 RRNMRRACRWFLRHRNRSWSIEQTVAFFKPVFEQLKANVHSYLAEEEAAGIQAEINALIK 1461
R RRA RWFLR R + A F P QL + L +
Sbjct: 1406 MRLGRRATRWFLRSRRNEQDAGRDTAHFGPKIAQLGLKLDELLEGPTRERWMVRYQGFVD 1465
Query: 1462 ENVPQDVASTVANMSTLFSTLDIAQIAQAEEKTVALVAETYFKLGARVELHWFLEQISAQ 1521
VP+ +A VA S L++ L I + A A VA+ +F +G+ ++L W+L++IS
Sbjct: 1466 AGVPELLARMVAGTSHLYTLLPIIEAADVTGHEPAQVAKAFFAVGSALDLTWYLQEISNL 1525
Query: 1522 PVTNHWQALARAAFREELDWQQRALTSVVLRTCSATCNAQSVISLWIETNQALLERWFHM 1581
PV N+WQALAR AFR+++D QQRA+T VL+ A + + ++LW E ++ ++ERW M
Sbjct: 1526 PVENNWQALAREAFRDDIDLQQRAITISVLQMADAPQDMDARVALWSEQHRGMVERWRAM 1585
Query: 1582 LADFKTSQNHEFAKFSVALREL 1603
L D + + ++A ++VA REL
Sbjct: 1586 LDDLRNATGTDYAMYAVANREL 1607