Pairwise Alignments

Query, 515 a.a., transglycosylase, Slt family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 457 a.a., murein transglycosylase D from Pectobacterium carotovorum WPP14

 Score =  293 bits (750), Expect = 9e-84
 Identities = 166/467 (35%), Positives = 280/467 (59%), Gaps = 45/467 (9%)

Query: 14  LLTGCQTLDNHQVTKPE--AQTVTT--ENTVPQYYLATEP-------ESAQVTDVWERIR 62
           LL GCQ +  H  ++P+  AQ++++  ++   +Y    E        +S    D+W  I 
Sbjct: 12  LLAGCQ-VSPHDTSQPKQHAQSLSSASQSEAGKYTDGREASARWLDDDSLAQRDLWNFIG 70

Query: 63  QGMQLPVPDKKLVNYYRDWYINNPKHLEVISERAAPYMYLIVEELEKRHLPIEIALLPII 122
             +++ VP+   +   +  Y+ N  +L  ++ RA PYMY IVE++++R +P+E+ LLPI+
Sbjct: 71  DELKMEVPENARIREQKMRYLKNKSYLHDVTLRAEPYMYWIVEQIKQRKMPMELVLLPIV 130

Query: 123 ESAFDPSASSASAASGLWQFTTPMASHFGLEMNWWYDGRRDVPASTTAALDMLEYLYNKT 182
           ESAFDPSA+S++ A+GLWQ       ++GL+ N WYDGRRDV ASTTAALDM++ L    
Sbjct: 131 ESAFDPSATSSANAAGLWQIIPGTGRNYGLKQNQWYDGRRDVIASTTAALDMMQRLNTMF 190

Query: 183 NNNWLYAIAAYNTGESKVLNAIKRNEDKGLKTDFWSLDLPKETKRYVPQLLALAEVIKHA 242
           + +WL  +AAYN+GE +V+ A+K N+ KG  T FW+L LP+ET  YVP++LAL++++K++
Sbjct: 191 DGDWLLTVAAYNSGEGRVMQAMKANKAKGKSTSFWALALPRETSIYVPKMLALSDILKNS 250

Query: 243 DEYGITLAPINNSPSIEVVDIDSQIDLAMAAGLANMTTTELAKLNPGYNRWATSPLGPHT 302
            +YG++L   N S ++  V++  QI+L  AA +A ++  +L   N GY R  T+P GPH 
Sbjct: 251 KKYGVSLPQPNESRALAKVELGQQIELTQAAEMAGLSLNKLKSYNSGYKRNVTAPNGPHY 310

Query: 303 LVLPIDKSEEFKKALAE-----------TESEARVSWLRYTIKSGDSIGSIAQKHHTTVN 351
           +++P    E+ K +LA+            ++++  +  +Y ++SGD++ +IA + + +  
Sbjct: 311 IMVPKAHVEQLKDSLADGDIAAIQPTRLAQTQSTPASQQYKVRSGDTLSAIAARLNVSTK 370

Query: 352 AIRAANGMKSNNIVAGRHLIIPVSADDKQLYALSTSQKLPKKAAGATSGNKLTYQVKSGD 411
            +++ N ++S    AG               AL   Q L + A  + +G+ +TYQV+ GD
Sbjct: 371 DLQSWNNLRS----AG---------------ALKVGQTL-QVAKASGNGSSITYQVRKGD 410

Query: 412 SLWQIAQAHNVSVKQLTAWNH-LSKDSKLQTGQKLTI-VAPQEKLDS 456
           SL  IA+ H V++  +  WN  ++K++ +Q G +LT+ V+   K DS
Sbjct: 411 SLASIAKRHGVNIADVMRWNTVINKNANIQPGDRLTLYVSSNIKPDS 457



 Score = 42.7 bits (99), Expect = 3e-08
 Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 11/120 (9%)

Query: 393 KAAGATSGNKLTYQVKSGDSLWQIAQAHNVSVKQLTAWNHLSKDSKLQTGQKLTIVAPQE 452
           K     SG K      +G     + +AH   +K   A   ++     +  Q  +  A Q+
Sbjct: 290 KLKSYNSGYKRNVTAPNGPHYIMVPKAHVEQLKDSLADGDIAAIQPTRLAQTQSTPASQQ 349

Query: 453 KLDSEHIRTVSYKVKSGDSLAQIASKFKVTVAELLEWNSLTPSQYILPGQVLKLVVDESN 512
                      YKV+SGD+L+ IA++  V+  +L  WN+L  +  +  GQ L++     N
Sbjct: 350 -----------YKVRSGDTLSAIAARLNVSTKDLQSWNNLRSAGALKVGQTLQVAKASGN 398