Pairwise Alignments

Query, 299 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 320 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  113 bits (283), Expect = 5e-30
 Identities = 78/294 (26%), Positives = 146/294 (49%), Gaps = 10/294 (3%)

Query: 1   MRITLRQLAVFEAVARSGQVAKAAEQVNLSPPATSMALAELEKQLNARLFERIGNRLQLN 60
           MR+TLRQL +F  V      ++AAE++ L+ PA S+ + +LE+ +   LFE +G +L L 
Sbjct: 6   MRMTLRQLQIFNEVCDLRSYSRAAEEMALTQPAVSLQIRQLEELIGQPLFEYVGKKLYLT 65

Query: 61  SQGNLLLPLAADLLHRVEQIEQAFTPQGGDLVGQLSVSASSTIGNYLLAKAAVAFCQQHT 120
                L   + D+  R+E ++   +   G L GQL ++  S+   Y +     AF Q+H 
Sbjct: 66  EAAEALQRASHDIFGRLESLDMQLSDMQGSLQGQLKLAIESS-AKYFVPHLFAAFKQRHP 124

Query: 121 QTHVEVAITNTQDVIQSVAQFRAEMGFIEGHCTDNRLHIEPWHKDRLLVFCHPAHPLAG- 179
           + ++ + + N    I+ ++  R ++  +     D  L   P+  + ++    P HPL   
Sbjct: 125 EVNLTLTVVNRAQAIRRLSDNRDDLIIMSMVPQDMGLEFLPFLNNPIVAVAPPQHPLCKL 184

Query: 180 QTVKSFAVKGQSWVLREEGSGTR----EYFVNAANELGMQPESKFCFTTPDAIKLAVKQG 235
           + ++   ++  + ++RE+GSGTR    EYF +         E      + DA +  V  G
Sbjct: 185 EQLRMQDLEPHTLLVREQGSGTRKACEEYFKDKRVHFAQTLE----VASADAQRECVIAG 240

Query: 236 AGLGVLSELALEKEISRKELALVTIEGLVLERQFYRITHKSRQATSLGLAFVQF 289
            G+ +L+  A+  E++   L  + +E L L R +  +  K+++ + + LAF+ F
Sbjct: 241 LGIALLTRHAVNLELATGMLKELPVEELPLYRSWCVVQAKAKRQSPVALAFLAF 294