Pairwise Alignments

Query, 299 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 289 a.a., putative transcriptional regulator LysR family from Pseudomonas putida KT2440

 Score =  100 bits (248), Expect = 5e-26
 Identities = 78/274 (28%), Positives = 128/274 (46%), Gaps = 8/274 (2%)

Query: 7   QLAVFEAVARSGQVAKAAEQVNLSPPATSMALAELEKQLNARLFERIGNRLQLNSQGNLL 66
           +L  F  VAR G + +AA+++ LS P  +  +  LE Q    LF R G RL L+ +G  L
Sbjct: 5   ELKAFYMVARLGSITQAAKKLGLSQPTVTTQIRSLEGQYAVELFYRGGRRLVLSEEGLRL 64

Query: 67  LPLAADLLHRVEQIEQAFTPQGGDLVGQLSVSASSTIGNYLLAKAAVAFCQQHTQTHVEV 126
           LP+   LL +   IE       G   G L ++A++    Y +      + ++  Q  V V
Sbjct: 65  LPMVKALLQQEADIEFELR-NSGQAQGSLRIAATAP---YYILDLVKIYRERLPQVEVAV 120

Query: 127 AITNTQDVIQSVAQFRAEMGFIEGHCTDNRLHIEPWHKDRLLVFCHPAHPLAG-QTVKSF 185
            I N+Q V++ +  +R ++        D RL       D L+V  H  HPLA  QTV   
Sbjct: 121 EIGNSQQVLEMLEDYRVDIAASSQWVEDARLVRRILGTDPLVVAVHRNHPLAHRQTVSIE 180

Query: 186 AVKGQSWVLREEGSGTREYFVNAANELGMQPESKFCFTTPDAIKLAVKQGAGLGVLSELA 245
            V G   ++RE+GS TR+       E G++  +     + ++I+ AV +  G+ V   +A
Sbjct: 181 VVSGHCLLMREKGSTTRKLTEQMMQEAGVKASAMMEIGSRESIREAVLRNIGISV---IA 237

Query: 246 LEKEISRKELALVTIEGLVLERQFYRITHKSRQA 279
             +     EL ++ +E   +  ++     + RQA
Sbjct: 238 RHEVPHNPELRVLALENAPVMHEYLYCLKERRQA 271