Pairwise Alignments

Query, 299 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 295 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score = 95.5 bits (236), Expect = 1e-24
 Identities = 76/292 (26%), Positives = 127/292 (43%), Gaps = 8/292 (2%)

Query: 3   ITLRQLAVFEAVARSGQVAKAAEQVNLSPPATSMALAELEKQLNARLFERIGNRLQLNSQ 62
           +T  QL  F  VA  G ++ AA+ ++LS PA S  L  L++     L++R G  ++L + 
Sbjct: 1   MTPEQLITFATVAEHGNISHAAQALHLSQPAVSGQLKLLQEAFGEPLYQRAGRGVRLTAA 60

Query: 63  GNLLLPLAADLLHRVEQIEQAFTPQGGDLVGQLSVSASSTIGNYLLAKAAVAFCQQHTQT 122
           G  LL  A  L     Q +       G   G + + AS+T  +YLL      F  ++   
Sbjct: 61  GEQLLAHAERLRETFRQAQALREAMRGLERGTVRIGASTTPASYLLPYLIADFHGRYPDV 120

Query: 123 HVEVAITNTQDVIQSVAQFRAEMGFIEGHCTDNR---LHIEPWHKDRLLVFCHPAHPLAG 179
            V  +  NT +++ ++     ++  IEG           + PW +D ++      HPLAG
Sbjct: 121 LVSTSHGNTAEIVAALDS--VDIALIEGPPGQELPLGTQVTPWREDEIVAIVPRGHPLAG 178

Query: 180 QTVKSFAVKGQ-SWVLREEGSGTREYFVNAANELGMQPESKFCFTTPDAIKLAVKQGAGL 238
              ++ A  G    VLRE GSG R+    A    G+           + +K AV+ G G+
Sbjct: 179 SDQQTLAALGAYPLVLRESGSGVRQIVERAFARDGVAMRVALEIAGVEGVKEAVRAGMGV 238

Query: 239 GVLSELALEKEISRKELALVTIEGLVLERQFYRITHKSRQATSLGLAFVQFC 290
           G +S +++  E        V  + LV  R+F  +   +   +     F++ C
Sbjct: 239 GFVSAMSIRHEDGALHRLQVAPQALV--RRFSILLPHAATPSRAASRFLELC 288