Pairwise Alignments

Query, 299 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 298 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score = 89.0 bits (219), Expect = 1e-22
 Identities = 74/289 (25%), Positives = 127/289 (43%), Gaps = 9/289 (3%)

Query: 3   ITLRQLAVFEAVARSGQVAKAAEQVNLSPPATSMALAELEKQLNARLFERIGNRLQLNSQ 62
           + + QL  F  VA       AA Q   + PA S+AL ELE++L   L E+ G R++L   
Sbjct: 8   LKIAQLRYFVLVAELKSFHAAARQAFRTQPAISLALRELEQKLGQALVEKGGGRVELTPY 67

Query: 63  GNLLLPLAADLLHRVEQIEQAFTPQGGDLVGQLSVSASSTIGNYLLAKAAVAFCQQHTQT 122
           G   LPL   L+   ++I +         +GQ+S++   ++ + +L      F   H   
Sbjct: 68  GEHCLPLFRGLIEHHDRIAREAMLFARHEIGQVSIATVPSVASRMLPGPLARFVAAHPNV 127

Query: 123 HVEVAITNTQDVIQSVAQFRAEMGFIEGHCTDNRLHIEPWHKDRLLVFCHPAHPL--AGQ 180
            V +     + V Q +AQ + + G       D++L   P   D++ V C   HPL  AG 
Sbjct: 128 QVSIQDGTAERVQQLLAQGQVDFGISSLWVDDDQLEFAPIVNDQVGVVCRSDHPLAQAGG 187

Query: 181 TVKSFAVKGQSWVLREEGSGTREYFVNAANELGMQPESKFCFTTPDAIKLAVKQGAGLGV 240
            +    + G   +     +GT +       E G+  +S+   +   ++   +++G G+  
Sbjct: 188 RLHWAQLLGVPMI----RNGTSQLLAGTEAE-GLLADSRLFISNMISLIAMLEEGVGIST 242

Query: 241 LSELALEKEISRKELALVTIEGLVLERQFYRITHKSRQATSLGLAFVQF 289
           L  LA  +E    +LA V +E   +ER    +T K R  + +  A + F
Sbjct: 243 LPYLAFPQE--NDKLAFVPLEEPRVERHIGMLTRKGRSLSPVAGALMAF 289