Pairwise Alignments

Query, 299 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 292 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  101 bits (251), Expect = 2e-26
 Identities = 79/288 (27%), Positives = 132/288 (45%), Gaps = 13/288 (4%)

Query: 5   LRQLAVFEAVARSGQVAKAAEQVNLSPPATSMALAELEKQLNARLFERIGNRLQLNSQGN 64
           L  L+ F A+A +G  + AAE++ L+ PA S  +A LE+QL+ RLF+R+G  + L   G 
Sbjct: 3   LANLSAFIAIAETGSFSGAAERLFLTQPAISKRIAGLEQQLDVRLFDRLGREVTLTEAGR 62

Query: 65  LLLPLAADLLHRVEQIEQAFTPQGGDLVGQLSVSASSTIGNYLLAKAAVAFCQQHTQTHV 124
            LLP A  +L+ ++   +A T   G + G+L+++ S  IG + L      F +Q+    +
Sbjct: 63  ALLPRAYQILNVLDDTRRALTNLTGAVSGRLTLATSHHIGLHRLPPLLRVFTRQYPAVAL 122

Query: 125 EVAITNTQDVIQSVAQFRAEMGFI----EGHCTDNRLHIEPWHKDRLLVFCHPAHPLAGQ 180
           ++   +++     +   RAE+  I    E H   + +   P   D L     P HPLA  
Sbjct: 123 DIQFMDSEQAYDEILHGRAEIAVITLAPEPH---HLVKAVPVWDDALDFVAAPEHPLANN 179

Query: 181 TVKSFAVKGQSWVLREEGSGTREYFVNAANE-LGMQPESKFCFTTPDAIKLAVKQGAGLG 239
              S A   +   +   G+    + V    E  G+ P         + IK+ V  G    
Sbjct: 180 QSVSLADIARHPAVFPGGNTFTHHIVQRLFESQGLTPNIAMSTNYLETIKMMVSIGLAWS 239

Query: 240 VLSELALEKEISRKELALVTIEGLVLERQFYRITHKSRQATSLGLAFV 287
           VL    L++++     A + + G+ L RQ   I H  R  ++   AF+
Sbjct: 240 VLPRTMLDEQV-----APIALPGIQLSRQLGYILHTERTLSNAARAFM 282