Pairwise Alignments

Query, 242 a.a., DNA polymerase III, epsilon subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 724 a.a., 3'-5' exonuclease DinG from Xanthobacter sp. DMC5

 Score = 88.6 bits (218), Expect = 3e-22
 Identities = 57/172 (33%), Positives = 93/172 (54%), Gaps = 14/172 (8%)

Query: 12  ILDTETTGMNQGSGAVYLGHRIIEIGCVEVINRR-LTGRYYHQYINPGQAIDPEAIAVHG 70
           + DTETTG++   G       I++IG   ++N R L    + Q ++PG++I    IAVHG
Sbjct: 536 VFDTETTGLDPAGG-----DEILQIGATRIVNGRILASECFDQLVDPGRSIPEAGIAVHG 590

Query: 71  ITDERVANEPRFHQIAQEFIDFISGAEIVAHNANFDVSFMDHEFSLLQPLGPKTRDICEI 130
           I  E V  +PR  ++   F  F +   +V HN  FD+ F+    +L +       D   +
Sbjct: 591 IRPEMVRGKPRIGEVLPAFHAFAAETVLVGHNVAFDMRFL----TLKEATSGVAFD-QPV 645

Query: 131 LDSLDIAKFLHPGQK-NNLDALCKRYGIDNSRRHYHGALLDAEILADVYLSM 181
           LD+L +A   HPG++ ++++A+  R G+  S R  H AL DA + AD++L +
Sbjct: 646 LDTLLLAGLAHPGEESHSMEAIAGRLGVTVSGR--HTALGDALVTADIFLKL 695