Pairwise Alignments

Query, 242 a.a., DNA polymerase III, epsilon subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 249 a.a., DNA polymerase III subunit epsilon from Paraburkholderia sabiae LMG 24235

 Score =  221 bits (562), Expect = 1e-62
 Identities = 119/237 (50%), Positives = 162/237 (68%), Gaps = 10/237 (4%)

Query: 9   RQVILDTETTGMNQGSGAVYLGHRIIEIGCVEVINRRLTGRYYHQYINPGQAIDPEAIAV 68
           RQ+ILDTETTG+N  +G      RIIEIGCVE++NRRLTG   H Y+NP +  DP A+AV
Sbjct: 2   RQIILDTETTGLNARTG-----DRIIEIGCVELVNRRLTGNNLHFYVNPERDSDPGALAV 56

Query: 69  HGITDERVANEPRFHQIAQEFIDFISGAEIVAHNANFDVSFMDHEFSLLQPLGPKTRDIC 128
           HG+T E ++++P+F +IA E  DF+  AE++ HNA FD+ F+D EF+LL  L P ++   
Sbjct: 57  HGLTTEFLSDKPKFAEIANELRDFLQDAELIIHNAPFDIGFLDAEFALL-GLPPFSKHCG 115

Query: 129 EILDSLDIAKFLHPGQKNNLDALCKRYGIDNSRRHYHGALLDAEILADVYLSMTGGQTK- 187
           E++D+L  AK + PG++N+LDALC R+GI N+ R  HGALLD+E+LA+VYL+MT GQ   
Sbjct: 116 EVIDTLVRAKSMFPGKRNSLDALCDRFGISNAHRTLHGALLDSELLAEVYLAMTRGQESL 175

Query: 188 -FNLSNEEVGQEGGGIQRFDPTSLNLKVICASADELVMHEKRLDLVAKS--GKCLWR 241
             ++  E  G E GG QR    +L L V+ AS DEL  HE  LD + K+  G  +WR
Sbjct: 176 VIDMIGEAAGGEAGGTQRVKLDTLELVVLAASDDELSEHEALLDGLDKALKGTSVWR 232