Pairwise Alignments

Query, 383 a.a., transcriptional regulator, AraC family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 356 a.a., transcriptional regulator, ornithine utilization from Pseudomonas putida KT2440

 Score = 67.0 bits (162), Expect = 8e-16
 Identities = 89/364 (24%), Positives = 142/364 (39%), Gaps = 48/364 (13%)

Query: 18  VASLVGLFKQRDLDCDKLLRGTGIFITDIRKPDHLISPKQLARLLDNALAQWPNGDLSFL 77
           V+ ++ +F+    +   LL G+GI   D+   D  I+ +Q  ++  NA+A+    D+   
Sbjct: 38  VSLILNVFQADGCEASALLAGSGIGPADLGHADARITTQQELQVCANAVAR--REDIGLE 95

Query: 78  LGQLWFPSQSGVLTSGMFCARDVKELIYFWHKYHWLTQPWLQTWRWQ-GEHEWHFLLSLD 136
           LGQ    S  G+L   +  +  + + +    +Y  L     +      G+  W F  S  
Sbjct: 96  LGQRMRVSCYGMLGYALLSSATLGDALRLALQYPALLGTVFKLRLLDDGQRVW-FSASDY 154

Query: 137 LGMHRHKQFFIELSLSSFMACFKQLLGQAWRG-SICFPYPAPDNLAHYYKYFGMDLRFDA 195
                   F  E  L S       LLG+        F +P P   A Y   F   + F A
Sbjct: 155 QDSPALSAFNAEFCLVSLKVICDDLLGRPLPLLGARFEHPRPGYHALYAGAFQCPIGFAA 214

Query: 196 PLCRISMAKNLLRQPSLFANQSLLYSQPENVDTHCAEDAQLPSASQSCIHGEAASPALDI 255
                +  +  L  P   A+            TH A        S+ C            
Sbjct: 215 EDNAFAFERRWLDMPLPLADPI----------THKA-------MSERC------------ 245

Query: 256 QPLQLPLRPQLNMAKAARQALFAQEFRLGLAAGIRLKLMRRTLSLPEMAQILEISPATLK 315
                    +LN+    RQA       LG    +  + +     L  +A+ +  S  TL+
Sbjct: 246 --------RRLNLEFTGRQAW------LGRIRQLLAQQLDAAPGLEGLARQMNCSSRTLR 291

Query: 316 RRLGEMGLNYGQLADESRLIRALYFLAEPEQDAHSIASSLSFSDASNFRRSFKRWTGQLP 375
           R L  +G +Y QL DE R  RA   LA+ +   + IA +L FS+ ++FR +F+RW+G  P
Sbjct: 292 RHLQALGSSYQQLLDELRFERAKQLLADEQMPIYRIAETLGFSETASFRHAFQRWSGVAP 351

Query: 376 GYFR 379
            +FR
Sbjct: 352 SHFR 355