Pairwise Alignments

Query, 383 a.a., transcriptional regulator, AraC family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 347 a.a., AraC family transcriptional regulator from Dickeya dianthicola ME23

 Score = 57.8 bits (138), Expect = 5e-13
 Identities = 74/363 (20%), Positives = 146/363 (40%), Gaps = 46/363 (12%)

Query: 19  ASLVGLFKQRDLDCDKLLRGTGIFITDIRKPDHLISPKQLARLLDNALAQWPNGDLSFLL 78
           + L     ++  D D++L  +GI    +  P   +      R+L+ A       +     
Sbjct: 27  SGLTDFIGEKGGDADRILGISGINPELLASPTLSVGLVNYCRVLEEAARYSDCDNFGLHY 86

Query: 79  GQLWFPSQSGVLTSGMFCARDVKELIY-FWHKYHWLTQPWLQTWRWQGEHEWHFLLSLDL 137
           G+ + P   G++     C+  +++ ++   + + +     L     +G+  W F   +  
Sbjct: 87  GRQFKPQALGLIGYVGLCSATLEQALHNVINAFPFHQHDTLIRLVDKGDC-WRFDYQVRH 145

Query: 138 GMHRHKQFFIELSLSSFMACFKQLLGQAWRG-SICFPYPAPDNLAHYYKYFGMDLRFDAP 196
           G   H +   EL+L   +   +   G+ W    + F +P P+    + K F   + FD P
Sbjct: 146 GAILHCRQDAELTLGMMLNLIRHAAGKNWAPREVHFEHPRPEQWHEHCKAFDAPVYFDQP 205

Query: 197 LCRISMAKNLLRQPSLFANQSLLYSQPENVDTHCAEDAQLPSASQSCIHGEAASPALDIQ 256
              + + K           + L+ + P++       D  L    Q          AL   
Sbjct: 206 FNSLLIPK-----------RDLMRAMPDH-------DPLLLLVVQD---------ALRQL 238

Query: 257 PLQLPLRPQLNMAKAARQALFAQEFRLGLAAGIRLKLMRRTLSLPEMAQILEISPATLKR 316
              +P +  ++MA+A                 +R  L +   SL E+A+ + +S  +L+R
Sbjct: 239 NSDVPQQSVVDMARAR----------------LRQVLPQGEPSLDEVAENIGLSSWSLQR 282

Query: 317 RLGEMGLNYGQLADESRLIRALYFLAEPEQDAHSIASSLSFSDASNFRRSFKRWTGQLPG 376
           RL + G+ + QL ++ R   A ++L + +     +A  L +S+ S F R+F+RW G  P 
Sbjct: 283 RLKDEGITFTQLVEKVRCEMATHYLQQRQLSISEMAFLLGYSEVSAFSRAFRRWFGISPR 342

Query: 377 YFR 379
            +R
Sbjct: 343 QWR 345