Pairwise Alignments

Query, 231 a.a., endonuclease III (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 212 a.a., DNA glycosylase/apyrimidinic (AP) lyase specific for damaged pyrimidinic sites from Pseudomonas putida KT2440

 Score =  308 bits (790), Expect = 4e-89
 Identities = 147/206 (71%), Positives = 176/206 (85%)

Query: 1   MNQQKRIQILTRLRENNPKPQTELNFSSPFELLVAVTLSAQATDVSVNKATDKLFPVANT 60
           MN  KR++I  RL E+NP P+TEL +++PFELLVAVTLSAQ+TDV VNKAT +LFPVANT
Sbjct: 1   MNAAKRLEIFRRLHEDNPDPKTELAYTTPFELLVAVTLSAQSTDVGVNKATARLFPVANT 60

Query: 61  AHSIYALGVEGLKEYIKTIGLYNNKAVNVIKACEILIEKYNGEVPEDREALESLPGVGRK 120
             +IYALGVEGL EYIKTIGLYN+KA NVI+AC +LIE+++ +VP+ REALE+LPGVGRK
Sbjct: 61  PEAIYALGVEGLSEYIKTIGLYNSKAKNVIEACRLLIERHDSQVPQTREALEALPGVGRK 120

Query: 121 TANVVLNTAFGWPTIAVDTHIFRLANRTKFAPGKNVVEVEERMLKVVPAEFKVDVHHWFI 180
           TANVVLNTAF  P +AVDTHIFR++NRT  APGK V+EVE+++LK VP ++ +D HHW I
Sbjct: 121 TANVVLNTAFRQPAMAVDTHIFRVSNRTGIAPGKTVLEVEKKLLKFVPKDYLLDAHHWLI 180

Query: 181 LHGRYTCLARKPRCGSCIIEDLCEYK 206
           LHGRY C ARKPRCGSC IEDLCEYK
Sbjct: 181 LHGRYVCQARKPRCGSCRIEDLCEYK 206