Pairwise Alignments

Query, 775 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 733 a.a., Sensory box protein/GGDEF domain protein from Pseudomonas putida KT2440

 Score =  251 bits (640), Expect = 1e-70
 Identities = 162/465 (34%), Positives = 238/465 (51%), Gaps = 21/465 (4%)

Query: 319 QFITDRGNHYALVSGE---------ENSDEHNYKAELERLAWRCGLTGLNNRSHFNRVL- 368
           Q I D  N   +V+GE         + S + +Y+ +L   A   GLTGL NR      L 
Sbjct: 269 QLIMDIANLPIMVNGEIVGVFGIARDISKQKHYERQLSINASHDGLTGLLNRLSLEDRLV 328

Query: 369 -------ERTTHGLLLLVDLVAFKRFNDTYGHENGDSLLIEVGRRLKHFSEINKATEIAR 421
                  +R     ++ +DL  FK  ND+ GH  GD +LIEV +RL    ++  A  + R
Sbjct: 329 QACRSSRQRKVQLAVMYIDLDGFKSINDSIGHYFGDQVLIEVAQRLTQ--QVRPADTVVR 386

Query: 422 VGSDEFAVLLTDDNAVYDLDYFSTRLYQHLAMPILIGREQVEPKPALAV-VDIASVANLF 480
           +G DEF VLLTD     D    + RL   +  P  I    +    ++ + V    +    
Sbjct: 387 MGGDEFVVLLTDLLRDEDAVPVAERLLASIGKPYCIQGIDLHVSTSIGITVSDGHIEQPM 446

Query: 481 APLTCADIAVQYAKKKKGTAIQVFNSTLLSAFKEDAQIERDLHSAIRGRQFELYYQPLRD 540
             +  AD+A+  AK++     Q + S L     E   +  DL  AI+ + F L+YQP  +
Sbjct: 447 KLIQQADMAMYKAKQQGRNNFQWYTSDLNHRVCEHRSLRNDLQKAIKTQSFSLHYQPQIE 506

Query: 541 LEQQTYIGAEALIRWHHPKKGVLYPGAFIDIAEQSGMINAIGSWVLEAACRQL-NIWQHH 599
              +  +G EAL+RW HP +G + P  FI +AE SG I  +  WVL+ AC QL ++    
Sbjct: 507 ARTRRVVGIEALLRWEHPVRGFISPAVFIPVAEDSGQIIPLSLWVLDTACAQLRDLCDQG 566

Query: 600 NADLSMHVNVSARQFFSGNLYEQVWQLLTRYRLKPKTLILEITETELMGDIRHATLLCQE 659
              +SM VN+S   F  G   E +  +L+++ L    L LEITE+ L+ ++  A      
Sbjct: 567 FNGISMAVNISPMHFQCGQFVECIQAVLSKHGLSAGQLELEITESLLLHNVEQAIATLHR 626

Query: 660 LAELGVGLAIDDFGTGYSSMRYLKQFPISKLKIDRSFISDLTISRESQEIVSAIIAMANA 719
           L +LGV +A+DDFGTG+SS+ YLK  PI K+KIDRSFI D++ +     I   II+MA+ 
Sbjct: 627 LKDLGVRIALDDFGTGFSSLSYLKCLPIDKIKIDRSFIQDISTNPHDAAITQGIISMAHH 686

Query: 720 LNISLTAEGVETAEQEAFLAKSLCHQAQGFLYSPALREPEFAQFL 764
           L++S+ AEGVETA Q  FL +  C   QG+ ++  +       FL
Sbjct: 687 LSLSVVAEGVETAPQVNFLERGRCDILQGYYFARPMSHEALRTFL 731