Pairwise Alignments

Query, 239 a.a., transcriptional regulator, TetR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 252 a.a., TetR family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 92.8 bits (229), Expect = 6e-24
 Identities = 63/212 (29%), Positives = 101/212 (47%), Gaps = 7/212 (3%)

Query: 33  TKTRILDAAEKLFAERGFSETSLRLITSKAEVNLASVNYHFGSKKELIRAVLARYLDVFM 92
           TKTR+LDA E LF + G+    LR IT +A+VNLA+VNYHFG K  L++ +L + L+   
Sbjct: 12  TKTRLLDATEALFIKYGYDAVLLRQITERAQVNLAAVNYHFGDKDSLMQTLLKQRLEPLN 71

Query: 93  PAASTAIKRLHT-APSQASLEEIFSALVDPLLDLN-----DLRTEGTTIFLQLLGRGYIE 146
                 + R    +      + +   L  P + L          EG + F++ LGR Y +
Sbjct: 72  EQRLELLARCEAESDGPLDCDTLLGVLFAPAMGLERSDPASASGEGRS-FIRFLGRVYSD 130

Query: 147 SQGHLRWFITTHYGQHLDTFVKAVSASAPHIPPAEMFWRLHFTLGTIVFTMASADALNDI 206
           +   ++ ++  HY      F +A + + P +P  E+  RL F L  I   MA  +    +
Sbjct: 131 TSPFIQEYLKVHYQPVFQRFFEAFALALPDLPRNELGVRLQFALKAISGVMAGTELRLLM 190

Query: 207 AAAEFGEHNDIEAVIRKVIPYMAAGVSVPVAS 238
            +   G       V+ K+I  ++A + VP  S
Sbjct: 191 NSMSLGRPATDAEVMAKLITLVSAAIRVPQQS 222