Pairwise Alignments

Query, 759 a.a., acyl-CoA dehydrogenase (1.3.8.-) (from data) from Shewanella oneidensis MR-1

Subject, 375 a.a., short-chain acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score =  102 bits (253), Expect = 5e-26
 Identities = 90/328 (27%), Positives = 157/328 (47%), Gaps = 28/328 (8%)

Query: 110 PPELWDYFKKEGFFALIIPKKFGGKAFSAYANSTIVSKLASRSVSAAVTVMVPNSLGPGE 169
           P E  D   + G F +++P+++GG      A +  + ++A+   + +  + V NS+G   
Sbjct: 36  PKEAIDEMAELGLFGMLVPEQWGGSDTGYVAYAMALEEIAAGDGACSTIMSVHNSVGCVP 95

Query: 170 LLTHYGTEEQKERWLPALAKGDEIPCFALTGPEAGSDAGAIPDVGIVCRGEFNGEEVLGL 229
           +L  +G E+QKE++L  LA G  +  FALT P+AGSDA ++       R    G+  +  
Sbjct: 96  IL-RFGNEQQKEQFLTPLATGAMLGAFALTEPQAGSDASSLK-----TRARLEGDHYV-- 147

Query: 230 KLTWNKRYITLAPVATVLGLAFQMRDPDGLLGEKKNLGITCALIPTDHPGVVIGRRHNPL 289
            L  +K++IT    A V+ + F + DP     E    GI+  ++PTD PG  + R  + L
Sbjct: 148 -LNGSKQFITSGQNAGVV-IVFAVTDP-----EAGKRGISAFIVPTDSPGYQVARVEDKL 200

Query: 290 NMAFMNGTTQ--GDEVFIPLDWIIGGPEFAGRGWRMLVECLSAGRGISLPALATASGHMA 347
                + T Q   D V +P+   +G     G G+++ +  L  GR I + + A      A
Sbjct: 201 GQ-HASDTCQIVFDNVQVPVANRLGA---EGEGYKIALANLEGGR-IGIASQAVGMARAA 255

Query: 348 TKTTTAYSYVRHQFGMAIGQFEGVQEALARIIANTYQLEAARRLTTTGIDLK--VKPSVV 405
            +    Y+  R  FG  + + + V   LA +     ++  AR++      L+   +P++V
Sbjct: 256 FEVARDYANERQSFGKPLIEHQAVAFRLADMAT---KISVARQMVLHAAALRDAGRPALV 312

Query: 406 TA-IAKFHMTELGRAVMNDAMDIQSGKG 432
            A +AK   +E+   V +DA+    G G
Sbjct: 313 EASMAKLFASEMAEKVCSDALQTLGGYG 340