Pairwise Alignments

Query, 759 a.a., acyl-CoA dehydrogenase (1.3.8.-) (from data) from Shewanella oneidensis MR-1

Subject, 814 a.a., acyl-CoA dehydrogenase FadE from Escherichia coli ECRC98

 Score =  771 bits (1991), Expect = 0.0
 Identities = 394/759 (51%), Positives = 524/759 (69%), Gaps = 18/759 (2%)

Query: 5   IIIALIAIIALFAVKSLRMQFITQPVFHFFKKVLPPLSDTEREAMEAGDVWWEGELFRGN 64
           +++ L  I+  F    +R   I+ PVF  F+KV+PP+S TE+EA++AG  WWEG+LF+G 
Sbjct: 47  VLVPLAIILVPFNFAPMRKSMISAPVFRGFRKVMPPMSRTEKEAIDAGTTWWEGDLFQGK 106

Query: 65  PNWNTLHSYGKPTLTAEEKDFIDNQVMTALTMIDDFDIVHNRKDLPPELWDYFKKEGFFA 124
           P+W  LH+Y +P LTAEE+ F+D  V  A  M +DF I H   DLPPELW Y K+  FFA
Sbjct: 107 PDWKKLHNYPQPRLTAEEQAFLDGPVEEACRMANDFQITHELADLPPELWAYLKEHRFFA 166

Query: 125 LIIPKKFGGKAFSAYANSTIVSKLASRSVSAAVTVMVPNSLGPGELLTHYGTEEQKERWL 184
           +II K++GG  FSAYA S ++ KL+  S   A+TV VPNSLGPGELL HYGT+EQK+ +L
Sbjct: 167 MIIKKEYGGLEFSAYAQSRVLQKLSGVSGILAITVGVPNSLGPGELLQHYGTDEQKDHYL 226

Query: 185 PALAKGDEIPCFALTGPEAGSDAGAIPDVGIVCRGEFNGEEVLGLKLTWNKRYITLAPVA 244
           P LA+G EIPCFALT PEAGSDAGAIPD GIVC GE+ G++VLG++LTWNKRYITLAP+A
Sbjct: 227 PRLARGQEIPCFALTSPEAGSDAGAIPDTGIVCMGEWQGQQVLGMRLTWNKRYITLAPIA 286

Query: 245 TVLGLAFQMRDPDGLLGEKKNLGITCALIPTDHPGVVIGRRHNPLNMAFMNGTTQGDEVF 304
           TVLGLAF++ DP+ LLG  ++LGITCALIPT  PGV IGRRH PLN+ F NG T G +VF
Sbjct: 287 TVLGLAFKLSDPEKLLGGAEDLGITCALIPTTTPGVEIGRRHFPLNVPFQNGPTLGKDVF 346

Query: 305 IPLDWIIGGPEFAGRGWRMLVECLSAGRGISLPALATASGHMATKTTTAYSYVRHQFGMA 364
           +P+D+IIGGP+ AG+GWRMLVECLS GRGI+LP+ +T         T AY+++R QF ++
Sbjct: 347 VPIDYIIGGPKMAGQGWRMLVECLSVGRGITLPSNSTGGVKSVALATGAYAHIRRQFKIS 406

Query: 365 IGQFEGVQEALARIIANTYQLEAARRLTTTGIDLKVKPSVVTAIAKFHMTELGRAVMNDA 424
           IG+ EG++E LARI  N Y ++AA  L T GI L  KP+V++AI K+H T  G+  + DA
Sbjct: 407 IGKMEGIEEPLARIAGNAYVMDAAASLITYGIMLGEKPAVLSAIVKYHCTHRGQQSIIDA 466

Query: 425 MDIQSGKGIQLGPKNYLGHPYMSNPISITVEGANILTRSLMIFGQGATRCHPYVLAEMEA 484
           MDI  GKGI LG  N+L   Y   PI+ITVEGANILTRS+MIFGQGA RCHPYVL EMEA
Sbjct: 467 MDITGGKGIMLGQSNFLARAYQGAPIAITVEGANILTRSMMIFGQGAIRCHPYVLEEMEA 526

Query: 485 AAMENQHDALTRFDSLLMGHMGYATRNAFSALFNALTASRFGNAPVSGETKQYYKDMSRL 544
           A    +++ +  FD LL  H+G+   N   + +  LT     + P    TK+YY+ ++RL
Sbjct: 527 A----KNNDVNVFDKLLFKHIGHVGSNKVRSFWLGLTRGLTSSTPTGDATKRYYQHLNRL 582

Query: 545 SSALAFMTDISMLIMGGDLKRKEMLSARMGDVLSQLYLGSATLKLFEDNGRQQDDLPAVR 604
           S+ LA ++D+SM ++GG LKR+E +SAR+GD+LSQLYL SA LK ++D GR + DLP V 
Sbjct: 583 SANLALLSDVSMAVLGGSLKRRERISARLGDILSQLYLASAVLKRYDDEGRNEADLPLVH 642

Query: 605 YVMANRLHLAAKALEDVIRNFPNRPVAWLLRALIFPIGNHFNAPSDKMATELVSGMLKPS 664
           + + + L+ A +A++D+++NFPNR VA LL  +IFP G H+ APSDK+  ++   +  P+
Sbjct: 643 WGVQDALYQAEQAMDDLLQNFPNRVVAGLLNVVIFPTGRHYLAPSDKLDHKVAKILQVPN 702

Query: 665 PARERI---TFLCPEFEGDVGGIAEVEQAFVAQYACKEIYKKLKKAQRSGELPAKVPNL- 720
             R RI    +L P     VG    +E+A V   A   I++++ K     EL   +P   
Sbjct: 703 ATRSRIGRGQYLTPSEHNPVG---LLEEALVDVIAADPIHQRICK-----ELGKNLPFTR 754

Query: 721 --VLFAKALEQGTISNDEHQTLLHADKLRLAAINVNDFE 757
              L   AL +G I  DE   L+ A++ RL +INV+DF+
Sbjct: 755 LDELAHNALAKGLIDKDEAAILVKAEESRLRSINVDDFD 793