Pairwise Alignments

Query, 460 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 493 a.a., Na+/H+ antiporter NhaC from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 51.2 bits (121), Expect = 8e-11
 Identities = 40/140 (28%), Positives = 72/140 (51%), Gaps = 8/140 (5%)

Query: 320 MLPAIGTVIAAFVFKDVCDAMLLPQYVIESLSPFMTPQLLPAVVFLSMAILAFATGSSWG 379
           +L  IG +   ++   +  AM+   Y ++ LSP +   LL A V    AI++ ATGSSW 
Sbjct: 83  ILLLIGALAGTWLLSGIVPAMIY--YGLKILSPGIF--LLAACVV--SAIVSIATGSSWT 136

Query: 380 IFAVTIPIVMPLAQSVGADIPLVIGALLSASSFGSQACFYSDSTVLAAQGSGCNLVSHA- 438
             A     ++ + +++G +  ++ GA++S + FG +    SD+T LA   +G +L +H  
Sbjct: 137 TVATVGVALLGIGKALGFEEGVIAGAIISGAYFGDKMSPLSDTTNLAPAMAGTDLFTHIR 196

Query: 439 -VTQLPYALIAAVIAFFGFI 457
            +T+     I   +  FG +
Sbjct: 197 HMTKTTVPSIVITLIIFGVL 216



 Score = 24.6 bits (52), Expect = 0.008
 Identities = 26/102 (25%), Positives = 38/102 (37%), Gaps = 8/102 (7%)

Query: 64  WLILVCGCFGALIALLVRTGGALAFGRNALKFAKGPRSSLFMTFILGIVIF----IDDYL 119
           WLI+    FG ++       G L     A+        SL  +     V F     D YL
Sbjct: 339 WLIITAMIFGGVM----EESGMLQVIAEAVIRKVHSLGSLIASTAATCVFFNLTTSDQYL 394

Query: 120 NALTVGETMKRVTDKFKVSREMLAYVVDSTAAPVCVLVPLST 161
             L  G     +  K  +  E L+  ++ +A    VLVP +T
Sbjct: 395 AILVPGRMYSDIYRKRGLKGENLSRTLEDSATVTSVLVPWNT 436