Pairwise Alignments

Query, 245 a.a., 3-deoxy-D-manno-octulosonate cytidylyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 254 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase from Pseudomonas putida KT2440

 Score =  175 bits (444), Expect = 7e-49
 Identities = 108/253 (42%), Positives = 151/253 (59%), Gaps = 14/253 (5%)

Query: 1   MNVTLLIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDERIKSAVE 60
           +  T++IPAR  S+R PGKPL  I GKPM+QHV+E+A  + G + + +ATDD  I  A +
Sbjct: 3   LEFTVVIPARLRSTRLPGKPLLLIAGKPMVQHVWEQARKS-GASRVVIATDDTSILEACQ 61

Query: 61  GFGGKVVMTSPDAASGTDRINDAINQLGLKDDDLVINLQGDQPLIDPTSIEQVISLFERH 120
            FG +V+MT  D  SGTDR+ +    LGL  D +V+N+QGD+PLI P  I+QV +    H
Sbjct: 62  AFGAEVMMTRADHESGTDRLAEVAAYLGLPADAIVVNVQGDEPLIPPVIIDQVAANLAAH 121

Query: 121 PGEFEMATLGYEIVNKAELDDPMHVKMVFDNDYYALYFSRARIPFGRDT---------KD 171
           P E  +ATL   I     + +P  VK+V D +  AL FSRA +P+ RDT         + 
Sbjct: 122 P-EAGIATLAEPIHEPETVFNPNAVKVVSDKNGLALTFSRAPLPWARDTFAKARDVLPEG 180

Query: 172 YPVYKHLGVYAYTRRFVQAFAALPLGRLEDLEKLEQLRALEYGHKIKV--AISAFDSIEV 229
            P  +H+G+YAY   F+  F +     LE  E LEQLRAL +G +I +  AI A  ++ V
Sbjct: 181 VPYRRHIGMYAYRVGFLHDFVSWGPCWLEQAEALEQLRALWHGVRIHIEDAIEA-PAVGV 239

Query: 230 DTPEDIRKCEQRL 242
           DTPED+ +  + L
Sbjct: 240 DTPEDLERVRRLL 252