Pairwise Alignments

Query, 245 a.a., 3-deoxy-D-manno-octulosonate cytidylyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 250 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase from Dickeya dadantii 3937

 Score =  194 bits (492), Expect = 2e-54
 Identities = 114/255 (44%), Positives = 155/255 (60%), Gaps = 15/255 (5%)

Query: 1   MNVTLLIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDERIKSAVE 60
           M  T +IPARY S+R PGKPLA I+GKPM+ HV ERA    G + + VATD   +  A+E
Sbjct: 1   MTFTAIIPARYASTRLPGKPLADIHGKPMVVHVMERAR-ESGASRVVVATDHADVARAIE 59

Query: 61  GFGGKVVMTSPDAASGTDRINDAINQLGLKDDDLVINLQGDQPLIDPTSIEQVI-SLFER 119
             GG+V +TSPD  SGT+R+ + I++ G  DD++++N+QGD+PLI P  I QV  +L   
Sbjct: 60  LAGGEVCLTSPDHNSGTERLAEVIDRYGFADDEIIVNVQGDEPLIPPVIIRQVADNLAGS 119

Query: 120 HPGEFEMATLGYEIVNKAELDDPMHVKMVFDNDYYALYFSRARIPFGRD--------TKD 171
             G   MATL   I    E  +P  VK+V D + YALYFSRA IP+ RD          D
Sbjct: 120 RAG---MATLAVPITTCEEAFNPNAVKVVTDAEGYALYFSRATIPWERDRFAESRDAIGD 176

Query: 172 YPVYKHLGVYAYTRRFVQAFAALPLGRLEDLEKLEQLRALEYGHKIKVAIS-AFDSIEVD 230
           Y   +H+G+YAY   F++ +      +LE +E LEQLR L YG KI VA++    S+ VD
Sbjct: 177 Y-FLRHIGIYAYRAGFIRRYVGWAPSQLEKIEMLEQLRVLWYGEKIHVAVAKEVPSVGVD 235

Query: 231 TPEDIRKCEQRLAVD 245
           TPED+ +    +A +
Sbjct: 236 TPEDLARVRAVMAAN 250